RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 WDTC1Q8N5D0 677 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 CAPN10Q9HC96 672 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 ST7Q9NRC1 585 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 ASNSD1Q9NWL6 643 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 SLCO1B1Q9Y6L6 691 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
CLPP-201ENST00000245816 F8VZ95 297 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 HLA-EP13747 358 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 ENGP17813 658 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 HARS2P49590 506 aaKnown RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 RPL6Q02878 288 aaKnown RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 UBXN1Q04323 297 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 ZNF33AQ06730 810 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 SPDYCQ5MJ68 293 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 SLC23A3Q6PIS1 610 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 ZDHHC17Q8IUH5 632 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 ZNF366Q8N895 744 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 DDI1Q8WTU0 396 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 AZIN2Q96A70 460 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 ZNF419Q96HQ0 510 aaPredicted RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 FCRL2Q96LA5 508 aaPredicted RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 PRICKLE1Q96MT3 831 aaPredicted RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 MIS12Q9H081 205 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 USP36Q9P275 1121 aaKnown RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 XPO7Q9UIA9 1087 aaKnown RBP16.78■□□□□ 0.28
CLPP-201ENST00000245816 NAALADL1Q9UQQ1 740 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 CACNA1BQ00975 2339 aa16.78■□□□□ 0.28
CLPP-201ENST00000245816 PAPSS1O43252 624 aaPredicted RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 LSM8O95777 96 aaKnown RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 NCAM1P13591 858 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 MAOBP27338 520 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 CD70P32970 193 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 JAM2P57087 298 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 YWHAZP63104 245 aaKnown RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 EIF4EBP2Q13542 120 aaPredicted RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 NUMA1Q14980 2115 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 SYCP1Q15431 976 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 TAF5Q15542 800 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 FILIP1LQ4L180 1135 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 PIK3R6Q5UE93 754 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 ANKS1BQ7Z6G8 1248 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 UNC45BQ8IWX7 931 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLPP-201ENST00000245816 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 C1orf131Q8NDD1 294 aaKnown RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 NEK11Q8NG66 645 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 CYB5D2Q8WUJ1 264 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 MYO19Q96H55 970 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 SLC39A13Q96H72 371 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 SPACA7Q96KW9 195 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 MTG2Q9H4K7 406 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 POPDC2Q9HBU9 364 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 TMEM9BQ9NQ34 198 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.28
CLPP-201ENST00000245816 WSB2Q9NYS7 404 aaPredicted RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 INTS6Q9UL03 887 aaKnown RBP16.77■□□□□ 0.28
CLPP-201ENST00000245816 E5RJQ4 531 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 KRT37O76014 449 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 C7P10643 843 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 SOX5P35711 763 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 SCNN1AP37088 669 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 STAT1P42224 750 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 POLR2FP61218 127 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 MPPE1Q53F39 396 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 ADGRF1Q5T601 910 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 SH3PXD2AQ5TCZ1 1133 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 NUGGCQ68CJ6 796 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 KIAA1324Q6UXG2 1013 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 METTL3Q86U44 580 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 ADAM32Q8TC27 787 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 DDX1Q92499 740 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 SERPINB11Q96P15 392 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 SLC2A11Q9BYW1 496 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 FAM207AQ9NSI2 230 aaPredicted RBP16.76■□□□□ 0.27
CLPP-201ENST00000245816 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
CLPP-201ENST00000245816 PCNX2A6NKB5 2137 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 ATP1A3P13637 1013 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 MAPK8P45983 427 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 GABRB2P47870 512 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 FAM193AP78312 1265 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 BNC1Q01954 994 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 MTA1Q13330 715 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 SDE2Q6IQ49 451 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 PIP4P1Q86T03 277 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 TMPRSS6Q8IU80 811 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 ZNF397Q8NF99 534 aaPredicted RBP16.75■□□□□ 0.27
CLPP-201ENST00000245816 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
CLPP-201ENST00000245816 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms