RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 BTBD1Q9H0C5 482 aa16.41■□□□□ 0.22
NME3-201ENST00000219302 DKK4Q9UBT3 224 aa16.41■□□□□ 0.22
NME3-201ENST00000219302 HESX1Q9UBX0 185 aa16.41■□□□□ 0.22
NME3-201ENST00000219302 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
NME3-201ENST00000219302 LOC400499M0QZD8 3231 aa16.41■□□□□ 0.22
NME3-201ENST00000219302 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 PCDHGA12O60330 932 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 ATP5BP06576 529 aaKnown RBP16.4■□□□□ 0.22
NME3-201ENST00000219302 CD19P15391 556 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 CD27P26842 260 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 SLC6A4P31645 630 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 CD70P32970 193 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 PRCPP42785 496 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 CAMK2BQ13554 666 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 FAM133BQ5BKY9 247 aaKnown RBP16.4■□□□□ 0.22
NME3-201ENST00000219302 RFWD3Q6PCD5 774 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 MARCH9Q86YJ5 346 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 TFAP2BQ92481 460 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 IGSF8Q969P0 613 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 TTC17Q96AE7 1141 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 MTG2Q9H4K7 406 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 SGK2Q9HBY8 427 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 SUN2Q9UH99 717 aa16.4■□□□□ 0.22
NME3-201ENST00000219302 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
NME3-201ENST00000219302 MUC22E2RYF6 1773 aaPredicted RBP16.4■□□□□ 0.22
NME3-201ENST00000219302 C10orf142B7Z368 130 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 H0Y8X5 98 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 TBL1XO60907 577 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 DNTTP04053 509 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 IGHV4-34P06331 123 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 SETSIPP0DME0 302 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 LCP1P13796 627 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 CTSKP43235 329 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
NME3-201ENST00000219302 TEAD4Q15561 434 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 COL28A1Q2UY09 1125 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 SOWAHCQ53LP3 525 aaPredicted RBP16.39■□□□□ 0.21
NME3-201ENST00000219302 ANKRD40Q6AI12 368 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 PMF1Q6P1K2 205 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 LAYNQ6UX15 382 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 PDZD3Q86UT5 571 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 SIX6OS1Q8N1H7 587 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 FIBINQ8TAL6 211 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 GOLGA1Q92805 767 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 AZIN2Q96A70 460 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 ZSWIM1Q9BR11 485 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 RSPH9Q9H1X1 276 aaPredicted RBP16.39■□□□□ 0.21
NME3-201ENST00000219302 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
NME3-201ENST00000219302 TRABD2BA6NFA1 517 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 SLC16A3O15427 465 aaKnown RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 IRAK2O43187 625 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 PAPSS1O43252 624 aaPredicted RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 TNFSF14O43557 240 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 ACSL4O60488 711 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 FSBPO95073 299 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 POLR2EP19388 210 aaKnown RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 YWHAEP62258 255 aaKnown RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 FKBP3Q00688 224 aaKnown RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 COBLL1Q53SF7 1204 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 ZNF776Q68DI1 518 aaPredicted RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 NADSYN1Q6IA69 706 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 USP30Q70CQ3 517 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 IRGQQ8WZA9 623 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 SLC35C1Q96A29 364 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 MRGPRX3Q96LB0 322 aa16.38■□□□□ 0.21
NME3-201ENST00000219302 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 INTS6Q9UL03 887 aaKnown RBP16.38■□□□□ 0.21
NME3-201ENST00000219302 GOLGA8CPA6NN73 597 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 VILLO15195 856 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 FYNP06241 537 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 PAEPP09466 180 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 TBXAS1P24557 533 aaPredicted RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 GRK6P43250 576 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 SLC11A2P49281 568 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 RGS7P49802 495 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 LRMPQ12912 555 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 PNOCQ13519 176 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 ARID5BQ14865 1188 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 SMAD1Q15797 465 aaKnown RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 CNGA2Q16280 664 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 TTC31Q49AM3 519 aaPredicted RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 NUGGCQ68CJ6 796 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 KIAA0895LQ68EN5 471 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 GALNT15Q8N3T1 639 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 CLEC4CQ8WTT0 213 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 HNRNPLLQ8WVV9 542 aaKnown RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 PRICKLE1Q96MT3 831 aaPredicted RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 PABPC3Q9H361 631 aaKnown RBP16.37■□□□□ 0.21
NME3-201ENST00000219302 EBF2Q9HAK2 575 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 SCUBE2Q9NQ36 999 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 SCML1Q9UN30 329 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 IGSF10Q6WRI0 2623 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 TMEM131Q92545 1883 aa16.37■□□□□ 0.21
NME3-201ENST00000219302 A0A1W2PPC4 97 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms