RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CACNA2D1P54289 1103 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 CCDC15Q0P6D6 951 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 ASPHQ12797 758 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 LAYNQ6UX15 382 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 SDCCAG8Q86SQ7 713 aaPredicted RBP15.51■□□□□ 0.07
EFNB1-201ENST00000204961 PIGZQ86VD9 579 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 WDR75Q8IWA0 830 aaKnown RBP15.51■□□□□ 0.07
EFNB1-201ENST00000204961 EXT2Q93063 718 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 ALKBH8Q96BT7 664 aaKnown RBP15.51■□□□□ 0.07
EFNB1-201ENST00000204961 LRRC4Q9HBW1 653 aa15.51■□□□□ 0.07
EFNB1-201ENST00000204961 TSPAN1O60635 241 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 ALDOAP04075 364 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 CHRNGP07510 517 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 DESP17661 470 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 EPHA3P29320 983 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 TKTP29401 623 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 ARRB2P32121 409 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 BEX3Q00994 111 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 STILQ15468 1287 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 PDCD2Q16342 344 aaPredicted RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 STRA8Q7Z7C7 330 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 GALNT4Q8N4A0 578 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 TFB1MQ8WVM0 346 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 EMID1Q96A84 441 aaPredicted RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 WWP1Q9H0M0 922 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 GBA2Q9HCG7 927 aaPredicted RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 CYP4F12Q9HCS2 524 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 CHRAC1Q9NRG0 131 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 HBS1LQ9Y450 684 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 E7ESA3 106 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 STX16-NPEPL1H3BU86 382 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 KIF3CO14782 793 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 SKIV2L2P42285 1042 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 TRIP10Q15642 601 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 ATP2A3Q93084 1043 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 FGD4Q96M96 766 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 IARS2Q9NSE4 1012 aaKnown RBP15.5■□□□□ 0.07
EFNB1-201ENST00000204961 NDE1Q9NXR1 346 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 LTFP02788 710 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 BPGMP07738 259 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 SKIP12755 728 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 LPPQ93052 612 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 ZNF333Q96JL9 665 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 TRIM4Q9C037 500 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
EFNB1-201ENST00000204961 TTC24A2A3L6 582 aaPredicted RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 TRPA1O75762 1119 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 IL18RAPO95256 599 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 SLC4A1P02730 911 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 ENO3P13929 434 aaPredicted RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 CDH5P33151 784 aaPredicted RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 NME5P56597 212 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 POU5F1BQ06416 359 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 FBXO48Q5FWF7 155 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 ZNF534Q76KX8 674 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 PIP4K2CQ8TBX8 421 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 NUF2Q9BZD4 464 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 RNF181Q9P0P0 153 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 SCOCQ9UIL1 159 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 hCG_2014768A0A024R1R8 64 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 CHADO15335 359 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 PEX1O43933 1283 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 PGM3O95394 542 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 JCHAINP01591 159 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 USP17L7P0C7H9 530 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 SEPT6Q14141 434 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 GRIK4Q16099 956 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 PCSK7Q16549 785 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 SPDYAQ5MJ70 313 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 WASHC2DQ5SRD0 308 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 TWF2Q6IBS0 349 aaKnown RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 LCLAT1Q6UWP7 414 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 ZNF781Q8N8C0 355 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 ZSCAN18Q8TBC5 510 aaPredicted RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 KRT82Q9NSB4 513 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 TSR3Q9UJK0 312 aaKnown RBP15.49■□□□□ 0.07
EFNB1-201ENST00000204961 ZNF112Q9UJU3 913 aa15.49■□□□□ 0.07
EFNB1-201ENST00000204961 TK2O00142 265 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 NCAM1P13591 858 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 HDCP19113 662 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 HIC1Q14526 733 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 POU6F1Q14863 301 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SPATA22Q8NHS9 363 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 GCNAQ96QF7 691 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 C20orf96Q9NUD7 363 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 TMEM233B4DJY2 109 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 C9JVG2 144 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 DFFAO00273 331 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 BUD23O43709 281 aaKnown RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 ITGA2BP08514 1039 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 ANPEPP15144 967 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 ATP6V1B1P15313 513 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SP100P23497 879 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 RPS12P25398 132 aaKnown RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 CTBP1Q13363 440 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 WSCD1Q658N2 575 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 PACS1Q6VY07 963 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms