RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Fads2p1Q0VAX3 487 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Larp4bQ6A0A2 741 aaKnown RBP12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Phf24Q80TL4 400 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Lamtor4Q8CF66 99 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Plekhg6Q8R0J1 787 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Uhrf1bp1B2KF50 1429 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zfyve9A2A8R0 1397 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Hoxc6P10629 235 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rplp2P99027 115 aaKnown RBP12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Serac1Q3U213 654 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gm5431Q5NCB3 844 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zscan26Q5RJ54 466 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Sema5aQ62217 1077 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rbm22Q8BHS3 420 aaKnown RBP12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Dennd2aQ8C4S8 1000 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Nlrp10Q8CCN1 673 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Cdc73Q8JZM7 531 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Olfr589Q8VGV8 317 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Cmtr1Q9DBC3 837 aa12.8□□□□□ -0.36
Col6a3-208ENSMUST00000188587 JchainP01592 159 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Aldh3a1P47739 453 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Lrrc8bQ5DU41 803 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fbxw2Q60584 422 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fbxo28Q8BIG4 368 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Stap2Q8R0L1 411 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tc2nQ91XT6 489 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Pbld2Q9CXN7 288 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tysnd1Q9DBA6 568 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Chst3O88199 472 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 H2-AaP01910 256 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Hspa1bP17879 642 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Abi3bpQ59IW6 1179 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Vsx2Q61412 361 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Awat2Q6E1M8 333 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gpt2Q8BGT5 522 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gprc5aQ8BHL4 356 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Znf473Q8BI67 892 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Terb2Q9D494 218 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Piwil1Q9JMB7 862 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 PtgisO35074 501 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Apba3O88888 571 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Il1rapl1P59823 695 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Plekha7Q3UIL6 1118 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tmem164Q6PHN7 296 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rfx4Q7TNK1 735 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Grik4Q8BMF5 956 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Exd2Q8VEG4 650 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fig4Q91WF7 907 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Ddx47Q9CWX9 455 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Lrrc17Q9CXD9 443 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Duoxa2Q9D311 320 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tbx20Q9ES03 445 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Dip2cE9PWR4 1557 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Umodl1Q5DID3 1319 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gm5814J3QP80 125 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Brd9Q3UQU0 596 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Pcyox1lQ8C7K6 495 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Ccdc134Q8C7V8 229 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rilpl2Q99LE1 197 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Antxr1Q9CZ52 562 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Slc1a2P43006 572 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 CltbQ6IRU5 229 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Q8BGC1 442 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tbrg4Q91YM4 630 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 PyglQ9ET01 850 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Cd97Q9Z0M6 818 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gm13941A2AJ38 245 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gm8011K7N6Y5 207 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Ifnar1P33896 590 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Prox1P48437 737 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tmprss11aQ3UQ41 389 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zfp280bQ505F4 534 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zdhhc17Q80TN5 632 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Ssh3Q8K330 649 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Gramd1aQ8VEF1 722 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Adcy4Q91WF3 1077 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rassf3Q99P51 232 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Rin2Q9D684 903 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 CpdO89001 1377 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Apol8A2VDH7 339 aaKnown RBP12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zfp78Q5U406 512 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Dpy19l3Q71B07 716 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Epn2Q8CHU3 595 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Limd1Q9QXD8 668 aa12.79□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Atp5bP56480 529 aaKnown RBP12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tmem35bQ3U0Y2 150 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Arhgef16Q3U5C8 713 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Sel1l2Q3V172 688 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fam20cQ5MJS3 579 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Pik3r5Q5SW28 871 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Als2clQ60I26 952 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 ChpfQ6IQX7 774 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 C1qtnf7Q8BVD7 289 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 EngaseQ8BX80 734 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fam227bQ9D518 532 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Fbxl18E9PYR1 771 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Tnfrsf11bO08712 401 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 TubP50586 505 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Zbtb14Q08376 449 aa12.78□□□□□ -0.36
Col6a3-208ENSMUST00000188587 Mtnr1aQ61184 353 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms