RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Q504N7 393 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Aste1Q8BIR2 672 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 PreplQ8C167 725 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 FtcdQ91XD4 541 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CenpmQ9CQA0 180 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Plscr2Q9DCW2 307 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Scamp2Q9ERN0 329 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc13a1Q9JHI4 594 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tll2Q9WVM6 1012 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cfap77A0A087WRI3 283 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mageb4A2A9R3 556 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pm20d2A3KG59 431 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm8020F6WLE9 229 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm8165L7N218 213 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rab12P35283 243 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sult2a1P52843 285 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 E2f2P56931 443 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc45a4Q0P5V9 785 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 S100a15aQ6S5I3 108 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ap4e1Q80V94 1122 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ric8bQ80XE1 520 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 AtcayQ8BHE3 372 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Arhgap12Q8C0D4 838 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Blzf1Q8R2X8 403 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Polr3fQ921X6 316 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tmem53Q9D0Z3 276 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 MmabQ9D273 237 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pramel3A2AHA7 463 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm7903A2AWL1 463 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ifi213D3Z5G0 586 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 4933408B17RikG3X9B4 273 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pik3r2O08908 722 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 DgkaO88673 730 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Emp1P47801 160 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Arhgap45Q3TBD2 1116 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 TraddQ3U0V2 310 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gnat3Q3V3I2 354 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cd300lfQ6SJQ7 337 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Got1l1Q7TSV6 404 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Znf598Q80YR4 908 aaKnown RBP9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ccdc60Q8C4J0 545 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kbtbd13Q8C828 458 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Saysd1Q8K190 188 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ttc36Q8VBW8 186 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr1416Q8VGU4 312 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pcdhb5Q91XZ5 792 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sacm1lQ9EP69 587 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cables1Q9ESJ1 568 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Spag6Q9JLI7 507 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm8126E9Q1N7 198 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm2832F7AEC7 200 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Id4P41139 161 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mc4rP56450 332 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Msto1Q2YDW2 556 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lpcat1Q3TFD2 534 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zscan10Q3URR7 782 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fam155aQ8CCS2 467 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kat14Q8CID0 779 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tceanc2Q8R2M0 207 aa9.16□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Oaz2O08608 189 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Lsp1P19973 330 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CrklP47941 303 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ccr4P51680 360 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cct4P80315 539 aaKnown RBP9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tbrg1Q3UB74 406 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Q3UJC8 639 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Samhd1Q60710 627 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CfiQ61129 603 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 GnasQ6R0H7 1133 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ThemisQ8BGW0 636 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pcdhb11Q91UZ8 797 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Npffr2Q924H0 417 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Scyl3Q9DBQ7 735 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Kcnq2Q9Z351 759 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mzf1S4R1L6 814 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm5737A0A140LI11 423 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Skint2A7XUX6 400 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Phf11bB4XVQ1 276 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nr1i3O35627 358 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Prss39O70169 367 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 ClppO88696 272 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Syt2P46097 422 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rab7aP51150 207 aaKnown RBP9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 MafP54843 370 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rsrp1Q3UC65 298 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nab2Q61127 525 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pan3Q640Q5 837 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gpr176Q80WT4 515 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sema3dQ8BH34 777 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tyw3Q8BSA9 257 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ddx19bQ8BZY3 494 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Scyl2Q8CFE4 930 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Morf4l2Q9R0Q4 288 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Tyw5A2RSX7 315 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 H2-M5A7VMS3 348 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 1700080E11RikE9Q9G1 206 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Grip2G3XA20 1042 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Dnajb3O35723 242 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 DffaO54786 331 aa9.15□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Slc27a3O88561 667 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms