RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GNG11P61952 73 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PDK2Q15119 407 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 DPYSL2Q16555 572 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 MS4A13Q5J8X5 152 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 TXNRD3NBQ6F5E7 133 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 ADGRG2Q8IZP9 1017 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 CPXM2Q8N436 756 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 UBL4BQ8N7F7 174 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 DEPDC1BQ8WUY9 529 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 OSCP1Q8WVF1 389 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 FGF14Q92915 247 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PRMT1Q99873 361 aaKnown RBP12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PLA2G2FQ9BZM2 168 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 SIK2Q9H0K1 926 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 TMPRSS4Q9NRS4 437 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PRKAG3Q9UGI9 489 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 XPO7Q9UIA9 1087 aaKnown RBP12.75□□□□□ -0.37
LINC00339-213ENST00000642137 SZT2Q5T011 3432 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 DRGXA6NNA5 263 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 DDX3YO15523 660 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 ZRANB2O95218 330 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 TNNT1P13805 278 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 PSMC3P17980 439 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 TACR2P21452 398 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 KDELR1P24390 212 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 HTR7P34969 479 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 HCAR3P49019 387 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 ARSEP51690 589 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 RWDD2BP57060 319 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 ETF1P62495 437 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 FCHO2Q0JRZ9 810 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 HTR4Q13639 388 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 AUHQ13825 339 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 RPS6KA1Q15418 735 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 CA9Q16790 459 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 C5orf22Q49AR2 442 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 FAM133BQ5BKY9 247 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 PIK3R6Q5UE93 754 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 NADSYN1Q6IA69 706 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 VITQ6UXI7 678 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 LRRC31Q6UY01 552 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 NYAP1Q6ZVC0 841 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 BBS7Q8IWZ6 715 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 KATNAL2Q8IYT4 538 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 RCOR2Q8IZ40 523 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 HSPH1Q92598 858 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 TLR10Q9BXR5 811 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 MAGEB5Q9BZ81 275 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 DHX35Q9H5Z1 703 aaKnown RBP12.74□□□□□ -0.37
LINC00339-213ENST00000642137 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
LINC00339-213ENST00000642137 LOC730098B7Z3J9 87 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 F5H5T6 163 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 GFRA2O00451 464 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 CHADO15335 359 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 SLC6A4P31645 630 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 CDH6P55285 790 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 RAP1GAP2Q684P5 730 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 YAF2Q8IY57 180 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 ZNF683Q8IZ20 524 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 PYROXD2Q8N2H3 581 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 TTC16Q8NEE8 873 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 EXD1Q8NHP7 514 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 KRT35Q92764 455 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 EPAS1Q99814 870 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 KXD1Q9BQD3 176 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 FAM83CQ9BQN1 747 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 RPP25Q9BUL9 199 aaKnown RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 GPATCH2LQ9NWQ4 482 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 RCOR3Q9P2K3 495 aaPredicted RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
LINC00339-213ENST00000642137 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
LINC00339-213ENST00000642137 IGLV3-10A0A075B6K4 115 aa12.72□□□□□ -0.37
LINC00339-213ENST00000642137 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
LINC00339-213ENST00000642137 E9PAM4 449 aa12.72□□□□□ -0.37
LINC00339-213ENST00000642137 FAM72CH0Y354 149 aa12.72□□□□□ -0.37
LINC00339-213ENST00000642137 KIF2AO00139 706 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms