RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZDHHC11BP0C7U3 371 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 GOLGA6DP0CG33 693 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TPSB2P20231 275 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ELF1P32519 619 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 RPL22P35268 128 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ALDH1A3P47895 512 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ATXN1P54253 815 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FPGSQ05932 587 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 STAT4Q14765 748 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TRIP4Q15650 581 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TPSAB1Q15661 275 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 HIF1AQ16665 826 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 NUGGCQ68CJ6 796 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 C1orf228Q6PIY5 440 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 SCD5Q86SK9 330 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ITIH5Q86UX2 942 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ZC3H18Q86VM9 953 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FIBCD1Q8N539 461 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FAM71DQ8N9W8 422 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ATAD1Q8NBU5 361 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 MCUQ8NE86 351 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 SCAMP5Q8TAC9 235 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FAM76AQ8TAV0 307 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 NDRG1Q92597 394 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 EDEM1Q92611 657 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 HDAC11Q96DB2 347 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TRMT2BQ96GJ1 504 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 BTN2A3PQ96KV6 586 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 SEPT5Q99719 369 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 RHOBTB2Q9BYZ6 727 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 USP29Q9HBJ7 922 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 EIF2B3Q9NR50 452 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 MRPL17Q9NRX2 175 aaKnown RBP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
PHGDH-215ENST00000641371 HAUS2Q9NVX0 235 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 GOLGA6AQ9NYA3 693 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 DTLQ9NZJ0 730 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 FETUBQ9UGM5 382 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 TRHDEQ9UKU6 1024 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 LZTS1Q9Y250 596 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 ASB3Q9Y575 518 aa10.04□□□□□ -0.8
PHGDH-215ENST00000641371 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 A0A0A0MRY4 1105 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 WDR27A2RRH5 827 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 SLC38A8A6NNN8 435 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ERI2A8K979 691 aaKnown RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 H0YGN5 161 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PSMD3O43242 534 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 GJB5O95377 273 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PFKLP17858 780 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ERCC2P18074 760 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 AMPD1P23109 780 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 DNAJB2P25686 324 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 EPHB2P29323 1055 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 OR1D2P34982 312 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 VPS41P49754 854 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ARPP19P56211 112 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 TBX4P57082 545 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 HTRA4P83105 476 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 DUSP4Q13115 394 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PRKD1Q15139 912 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 RASA2Q15283 850 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 TRIP13Q15645 432 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 TAF12Q16514 161 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 DDR2Q16832 855 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ARMC3Q5W041 872 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ITPRIPL1Q6GPH6 555 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 TIGD7Q6NT04 549 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ARHGEF18Q6ZSZ5 1173 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 UBE2Q1Q7Z7E8 422 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 CCDC25Q86WR0 208 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 NAT8LQ8N9F0 302 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 HTR3CQ8WXA8 447 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PRCCQ92733 491 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 FATE1Q969F0 183 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 AZIN2Q96A70 460 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PGM2Q96G03 612 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 SLC39A13Q96H72 371 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ATP6V1G3Q96LB4 118 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 MYRFLQ96LU7 910 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 SPATA13Q96N96 652 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 SERPINB12Q96P63 405 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PGLYRP2Q96PD5 576 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 RBM15Q96T37 977 aaKnown RBP eCLIP10.03□□□□□ -0.84e-7■■■□□ 17.3
PHGDH-215ENST00000641371 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 ADAM7Q9H2U9 754 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 RXFP1Q9HBX9 757 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 TMBIM4Q9HC24 238 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms