RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HTR3CQ8WXA8 447 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 SPATA13Q96N96 652 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 TRIM4Q9C037 500 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 MTMR10Q9NXD2 777 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 ERAP1Q9NZ08 941 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 DTLQ9NZJ0 730 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 MEI4A8MW99 385 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 FZD9O00144 591 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 BAG2O95816 211 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 TFE3P19532 575 aaPredicted RBP20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 ADORA2AP29274 412 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 COPAP53621 1224 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 INSCQ1MX18 579 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 LRRC8BQ6P9F7 803 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 TFB1MQ8WVM0 346 aaKnown RBP20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 EIF2B3Q9NR50 452 aaKnown RBP20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 DNAJC28Q9NX36 388 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 PTPRFP10586 1907 aa20.71■□□□□ 0.91
SYNGAP1-227ENST00000638142 CCNT2O60583 730 aaKnown RBP20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 GABBR2O75899 941 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 RTN3O95197 1032 aaPredicted RBP20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 LYNP07948 512 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 CDC16Q13042 620 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 PRKG1Q13976 671 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 PCLAFQ15004 111 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 NCBP2-AS2Q69YL0 99 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC26A9Q7LBE3 791 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 UNC5BQ8IZJ1 945 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 GSTCDQ8NEC7 633 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 KIF12Q96FN5 646 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 OLFM3Q96PB7 478 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 KCTD15Q96SI1 283 aaPredicted RBP20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 NAT9Q9BTE0 207 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 B3GNT5Q9BYG0 378 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 RNPEPQ9H4A4 650 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 S100A14Q9HCY8 104 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 FAM49BQ9NUQ9 324 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 GGA3Q9NZ52 723 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 SIN3BO75182 1162 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 DGKIO75912 1065 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 PGK2P07205 417 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 PGAM1P18669 254 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 KCNA4P22459 653 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 IGBP1P78318 339 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 FBXO16Q8IX29 292 aaPredicted RBP20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 COPS5Q92905 334 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 PPP2R3CQ969Q6 453 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 GBP5Q96PP8 586 aa20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 MRPL45Q9BRJ2 306 aaKnown RBP20.7■□□□□ 0.9
SYNGAP1-227ENST00000638142 ARHGAP42A6NI28 874 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 BUD23O43709 281 aaKnown RBP20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC25A27O95847 323 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 ALOX15P16050 662 aaPredicted RBP20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 SCNN1AP37088 669 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC25A3Q00325 362 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 VGLL4Q14135 290 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC25A41Q8N5S1 370 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 CLMNQ96JQ2 1002 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 USP2O75604 605 aaPredicted RBP20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 PROCP04070 461 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 ITGA2BP08514 1039 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 TXNP10599 105 aaKnown RBP20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 INSRRP14616 1297 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 VAV1P15498 845 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 PDE1BQ01064 536 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 LINC01465Q8N7H1 131 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 JADE3Q92613 823 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 MMP19Q99542 508 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 AKT3Q9Y243 479 aa20.69■□□□□ 0.9
SYNGAP1-227ENST00000638142 UBTFL6P0CB48 400 aaPredicted RBP20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ERFP50548 548 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 POLE2P56282 527 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 HNRNPDQ14103 355 aaKnown RBP20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 DHDDSQ86SQ9 333 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ARHGAP18Q8N392 663 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 CCDC33Q8N5R6 958 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 TRPM4Q8TD43 1214 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 PPP1R16BQ96T49 567 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 SORT1Q99523 831 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 PRDM16Q9HAZ2 1276 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ZDHHC7Q9NXF8 308 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC17A6Q9P2U8 582 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 SNX9Q9Y5X1 595 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 USP1O94782 785 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 STK10O94804 968 aaKnown RBP20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 CYP2C8P10632 490 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 IDH3AP50213 366 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ATXN1P54253 815 aaKnown RBP20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 BTKQ06187 659 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ARHGAP17Q68EM7 881 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 MAVSQ7Z434 540 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 COLGALT1Q8NBJ5 622 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 SLC16A10Q8TF71 515 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 CMTM5Q96DZ9 223 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 VCX3BQ9H321 246 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 RCOR3Q9P2K3 495 aaPredicted RBP20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 USP3Q9Y6I4 520 aa20.68■□□□□ 0.9
SYNGAP1-227ENST00000638142 OPHN1O60890 802 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms