RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 VCPP55072 806 aaKnown RBP16.57■□□□□ 0.24
CLN6-216ENST00000636876 SCAPQ12770 1279 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 DHCR24Q15392 516 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 ARL13BQ3SXY8 428 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 LY6G5CQ5SRR4 150 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 DAB2IPQ5VWQ8 1189 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 RHBDF2Q6PJF5 856 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 CHSY1Q86X52 802 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 TMEM25Q86YD3 366 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 UBALD2Q8IYN6 164 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 CCDC185Q8N715 623 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 CSGALNACT1Q8TDX6 532 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 CALR3Q96L12 384 aaKnown RBP16.57■□□□□ 0.24
CLN6-216ENST00000636876 HAPLN3Q96S86 360 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
CLN6-216ENST00000636876 C1QTNF1Q9BXJ1 281 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 SPHK2Q9NRA0 654 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 GTSE1Q9NYZ3 720 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 TRIM10Q9UDY6 481 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 HS3ST4Q9Y661 456 aa16.57■□□□□ 0.24
CLN6-216ENST00000636876 F5P12259 2224 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 OTOL1A6NHN0 477 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 PRPSAP2O60256 369 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 ADH1CP00326 375 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 TACR2P21452 398 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 SLC6A4P31645 630 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 PLA2G5P39877 138 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 AIF1P55008 147 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 MLLT6P55198 1093 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 NR1H3Q13133 447 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 MS4A13Q5J8X5 152 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 ACBD5Q5T8D3 534 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 RAP1GAP2Q684P5 730 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 RFWD3Q6PCD5 774 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 ZNF662Q6ZS27 426 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 CYP4V2Q6ZWL3 525 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 CPNE8Q86YQ8 564 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 PEBP4Q96S96 227 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
CLN6-216ENST00000636876 TSGA10Q9BZW7 698 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 MARK1Q9P0L2 795 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 PCSK1NQ9UHG2 260 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 USP18Q9UMW8 372 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 PPP2R2CQ9Y2T4 447 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 MYOFQ9NZM1 2061 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 TICRRQ7Z2Z1 1910 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 COL4A2P08572 1712 aa16.56■□□□□ 0.24
CLN6-216ENST00000636876 HOXC11O43248 304 aaPredicted RBP16.55■□□□□ 0.24
CLN6-216ENST00000636876 BUB1O43683 1085 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 TSPAN3O60637 253 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 ADH5P11766 374 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 TCF4P15884 667 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 GGCXP38435 758 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 AUHQ13825 339 aaKnown RBP16.55■□□□□ 0.24
CLN6-216ENST00000636876 EFHC2Q5JST6 749 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 TPGS1Q6ZTW0 290 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 LGI2Q8N0V4 545 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 TTC8Q8TAM2 541 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 MYEOVQ96EZ4 313 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 PRICKLE1Q96MT3 831 aaPredicted RBP16.55■□□□□ 0.24
CLN6-216ENST00000636876 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 OSBPL2Q9H1P3 480 aa16.55■□□□□ 0.24
CLN6-216ENST00000636876 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 F5H5T6 163 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 KRT86O43790 486 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 PENKP01210 267 aaPredicted RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 CYBBP04839 570 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 IL1R2P27930 398 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 SLC1A1P43005 524 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 SSR1P43307 286 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 NAP1L1P55209 391 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 NRG1Q02297 640 aaPredicted RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 SLC25A11Q02978 314 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 GAD2Q05329 585 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 IFI16Q16666 785 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 GAB4Q2WGN9 574 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 MPPE1Q53F39 396 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 BOLA3Q53S33 107 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 ERMARDQ5T6L9 678 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 C11orf63Q6NUN7 778 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 FBXL22Q6P050 247 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 C14orf80Q86SX3 495 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 PSTKQ8IV42 348 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 ZNF683Q8IZ20 524 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 HJURPQ8NCD3 748 aaPredicted RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 TMA16Q96EY4 203 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 P2RY11Q96G91 374 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 SNRNP25Q9BV90 132 aaKnown RBP16.54■□□□□ 0.24
CLN6-216ENST00000636876 BBS2Q9BXC9 721 aa16.54■□□□□ 0.24
CLN6-216ENST00000636876 C8orf33Q9H7E9 229 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms