RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 PTPN18Q99952 460 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 SIKE1Q9BRV8 207 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 IGSF9Q9P2J2 1179 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 SDR42E2A6NKP2 422 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 CYB561D2O14569 222 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 TREHO43280 583 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 METTL18O95568 372 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 TKTP29401 623 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 RPL9P32969 192 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 CRHR1P34998 444 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 OSTM1Q86WC4 334 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ANKLE1Q8NAG6 615 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 SH3TC2Q8TF17 1288 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 C7orf26Q96N11 449 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.36
PTPN11-205ENST00000635625 KCNK17Q96T54 332 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 MOCS1Q9NZB8 636 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 SLC17A7Q9P2U7 560 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 ZFP69BQ9UJL9 534 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 GJD2Q9UKL4 321 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 PLLPQ9Y342 182 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.36
PTPN11-205ENST00000635625 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.37
PTPN11-205ENST00000635625 MANSC4A6NHS7 340 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 AP3B1O00203 1094 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 AVILO75366 819 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 F9P00740 461 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 NEFHP12036 1026 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 GOT1P17174 413 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 PGAM1P18669 254 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 NRLP54845 237 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 KCNJ2P63252 427 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 DPYSQ14117 519 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 SCML4Q8N228 414 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 IRGQQ8WZA9 623 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ANKRD27Q96NW4 1050 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 FAM111AQ96PZ2 611 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 NPHS2Q9NP85 383 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 MAD1L1Q9Y6D9 718 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 GOLGA8RI6L899 631 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 EEF2KO00418 725 aaKnown RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 PTGESO14684 152 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 IGHA2P01877 340 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 AKR1A1P14550 325 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 AMPD1P23109 780 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ARFIP2P53365 341 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 PURAQ00577 322 aaKnown RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 SF3A3Q12874 501 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 DCAF6Q58WW2 860 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 KYAT3Q6YP21 454 aaKnown RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 CLEC20AQ6ZU45 233 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 PRPF39Q86UA1 669 aaKnown RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 FAM228AQ86W67 206 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 DEPDC1BQ8WUY9 529 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 MED10Q9BTT4 135 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 KCNK4Q9NYG8 393 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 GIT1Q9Y2X7 761 aa12.76□□□□□ -0.37
PTPN11-205ENST00000635625 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-205ENST00000635625 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 M0QYT0 321 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 RNF103O00237 685 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 MFSD11O43934 449 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 RFPL1O75677 317 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 KRT16P08779 473 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 VAV1P15498 845 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 MX2P20592 715 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 PCSK1P29120 753 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 SERPINB6P35237 376 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 VEGFBP49765 207 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 RAB27AP51159 221 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 HIC1Q14526 733 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 KRT72Q14CN4 511 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 RAB41Q5JT25 222 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 OTUD1Q5VV17 481 aaPredicted RBP12.75□□□□□ -0.37
PTPN11-205ENST00000635625 RFX8Q6ZV50 586 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
PTPN11-205ENST00000635625 CLNKQ7Z7G1 428 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms