RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 NTSP30990 170 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 RPL9P32969 192 aaKnown RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 RALGDSQ12967 914 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 TCEA2Q15560 299 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PTGISQ16647 500 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 BBS4Q96RK4 519 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 OSGEPL1Q9H4B0 414 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 CHP2O43745 196 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 SKAP2O75563 359 aaPredicted RBP13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 STRA8Q7Z7C7 330 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 SLFN11Q7Z7L1 901 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 POLR1BQ9H9Y6 1135 aa13.49□□□□□ -0.25
SYNGAP1-208ENST00000629380 PHGDHO43175 533 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCT3P49368 545 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ERFP50548 548 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 LRRC74BQ6ZQY2 392 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 C15orf38-AP3S2A0A0A6YYH1 394 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CST8O60676 142 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 HLA-DRAP01903 254 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CUL2Q13617 745 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 BHLHB9Q6PI77 547 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ARPINQ7Z6K5 226 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 FIG4Q92562 907 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CKLFQ9UBR5 152 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 C17orf102A2RUQ5 167 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 COMTP21964 271 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 GPR15P49685 360 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ACOT2P49753 483 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PSMB9P28065 219 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PNKPQ96T60 521 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CHURC1-FNTBB4DL54 471 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CES2O00748 559 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 MAPK7Q13164 816 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 SGCGQ13326 291 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 NR6A1Q15406 480 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 TPD52L3Q96J77 140 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 LINC00854A0A1B0GVQ3 168 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ATP9AO75110 1047 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 EPN2O95208 641 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 NPTXRO95502 500 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CYP2A6P11509 494 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 TPP2P29144 1249 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMEM159Q96B96 161 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 CLK3P49761 638 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 BIKQ13323 160 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PCNX4Q63HM2 1172 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 GATAD2AQ86YP4 633 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ASB2Q96Q27 587 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 RUVBL2Q9Y230 463 aaKnown RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PAX3P23760 479 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 COILP38432 576 aaPredicted RBP13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 BTN2A1Q7KYR7 527 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 GSTK1Q9Y2Q3 226 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZMYM2Q9UBW7 1377 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 KHDRBS3O75525 346 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 OR6A2O95222 327 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 CRABP2P29373 138 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 FOXO4P98177 505 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 MMADHCQ9H3L0 296 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 RXFP1Q9HBX9 757 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 SUPT7LO94864 414 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 ITGB6P18564 788 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 CCR4P51679 360 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 CORO7P57737 925 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 PTSQ03393 145 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 DDI2Q5TDH0 399 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 C9orf72Q96LT7 481 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 BTBD7Q9P203 1132 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 MYRFQ9Y2G1 1151 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 RAD51CO43502 376 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 TMEM253P0C7T8 217 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 GSTM5P46439 218 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 XRCC4Q13426 336 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 SAMD4BQ5PRF9 694 aaKnown RBP13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 SLC38A2Q96QD8 506 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
SYNGAP1-208ENST00000629380 CMTM6Q9NX76 183 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms