RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PABPC1LQ4VXU2 614 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 C10orf120Q5SQS8 335 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 BEND6Q5SZJ8 279 aaPredicted RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PDE12Q6L8Q7 609 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 KLHDC10Q6PID8 442 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 C1orf228Q6PIY5 440 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 Q7L0L9 218 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 CDKL3Q8IVW4 592 aaPredicted RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PYROXD2Q8N2H3 581 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 ELMOD1Q8N336 334 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 ATP6V0D2Q8N8Y2 350 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 MRPL43Q8N983 215 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 SPPL3Q8TCT6 385 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 AENQ8WTP8 325 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 POF1BQ8WVV4 589 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 RSAD2Q8WXG1 361 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 CAVIN3Q969G5 261 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PSMG2Q969U7 264 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 KLHL5Q96PQ7 755 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 TGS1Q96RS0 853 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 TCF25Q9BQ70 676 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 FERMT1Q9BQL6 677 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 DPH5Q9H2P9 285 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PLEKHA4Q9H4M7 779 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 TLR9Q9NR96 1032 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 TRPM5Q9NZQ8 1165 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 MARCH2Q9P0N8 246 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 WHRNQ9P202 907 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 OR12D3Q9UGF7 316 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 ASIC3Q9UHC3 531 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 SFMBT1Q9UHJ3 866 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 DNMT3LQ9UJW3 386 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 NFU1Q9UMS0 254 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 HBS1LQ9Y450 684 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PCDHA11Q9Y5I1 949 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 PATJQ8NI35 1801 aa7.8□□□□□ -1.16
PTP4A1-206ENST00000627002 SLC12A8A0AV02 714 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ESYT3A0FGR9 886 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ZNF840PA6NDX5 716 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 C2orf71A6NGG8 1288 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 KCNU1A8MYU2 1149 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 H7C0C1 242 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 DCLK1O15075 740 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 NCAM2O15394 837 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 FGF10O15520 208 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 MSI1O43347 362 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TGM5O43548 720 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TLR5O60602 858 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 GLUD1P00367 558 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 KRT14P02533 472 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 LRG1P02750 347 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 RBP3P10745 1247 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 PECAM1P16284 738 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ITIH2P19823 946 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 AMPD1P23109 780 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 SERPINB6P35237 376 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ATP5C1P36542 298 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ADCY8P40145 1251 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TNNT3P45378 269 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 RPL21P46778 160 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ATP5OP48047 213 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ERVFC1P60507 584 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 PAFAH1B3Q15102 231 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 HECTD3Q5T447 861 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 PLPP4Q5VZY2 271 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 NUGGCQ68CJ6 796 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 NCBP2-AS2Q69YL0 99 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 DARS2Q6PI48 645 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 LILRA6Q6PI73 481 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 C4orf22Q6V702 233 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 HDXQ7Z353 690 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 DNAJB7Q7Z6W7 309 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 UNC45BQ8IWX7 931 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 KREMEN2Q8NCW0 462 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 MICAL1Q8TDZ2 1067 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 LRRC45Q96CN5 670 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TBC1D31Q96DN5 1066 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 SNF8Q96H20 258 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 SLC39A13Q96H72 371 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 BTN2A3PQ96KV6 586 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 FCRL2Q96LA5 508 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 C1orf74Q96LT6 269 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 FMO2Q99518 471 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 FAM118BQ9BPY3 351 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 HINFPQ9BQA5 517 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TMEM121Q9BTD3 319 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TRIM31Q9BZY9 425 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 NACA2Q9H009 215 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 BRD8Q9H0E9 1235 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 TSPYL1Q9H0U9 437 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 CATSPERBQ9H7T0 1116 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 PCDH9Q9HC56 1237 aa7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ALG13Q9NP73 1137 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-206ENST00000627002 ANLNQ9NQW6 1124 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms