RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 MAMLD1Q13495 774 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 ANKLE1Q8NAG6 615 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 ACTRT1Q8TDG2 376 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 COG1Q8WTW3 980 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 IRGQQ8WZA9 623 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 RAD9AQ99638 391 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 PRKD2Q9BZL6 878 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 FAM153AQ9UHL3 310 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 LNPEPQ9UIQ6 1025 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 L1RE1Q9UN81 338 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 TRIM33Q9UPN9 1127 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 GLP2RO95838 553 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 CARSP49589 748 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 EIF2B5Q13144 721 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 MEA1Q16626 185 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 RARS2Q5T160 578 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 SLC39A5Q6ZMH5 540 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 CACUL1Q86Y37 369 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 GSPT2Q8IYD1 628 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 TGS1Q96RS0 853 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 TASP1Q9H6P5 420 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 BCAS3Q9H6U6 928 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 ACP6Q9NPH0 428 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 EVA1BQ9NVM1 165 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 SLC39A10Q9ULF5 831 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 BAZ2AQ9UIF9 1905 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 ANP32DO95626 131 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 WARSP23381 471 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 HSPA9P38646 679 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 MAGOHP61326 146 aaKnown RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 SPIRE1Q08AE8 756 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 ACOX1Q15067 660 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 KYNUQ16719 465 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 HIST2H2ACQ16777 129 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 MPPE1Q53F39 396 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 HIST2H2AA3Q6FI13 130 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 USP45Q70EL2 814 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 PHACTR4Q8IZ21 702 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 MMGT1Q8N4V1 131 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 VCX3BQ9H321 246 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 OSGEPL1Q9H4B0 414 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 TRABDQ9H4I3 376 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 TRIM45Q9H8W5 580 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 CLDND1Q9NY35 253 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 SMARCAL1Q9NZC9 954 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 KIAA1522Q9P206 1035 aaPredicted RBP10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 FBXO10Q9UK96 956 aa10.47□□□□□ -0.73
SRGAP2-217ENST00000624873 APOC4-APOC2K7ER74 178 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 KCNK1O00180 336 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 O00370 1275 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 SOAT2O75908 522 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 APOC2P02655 101 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 RARAP10276 462 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 TKTP29401 623 aaKnown RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 FMO1Q01740 532 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 MORF4L2Q15014 288 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 FAM83EQ2M2I3 478 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 SEMA4DQ92854 862 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 BTN2A3PQ96KV6 586 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 YIPF2Q9BWQ6 316 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 FGFBP2Q9BYJ0 223 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 PCDH9Q9HC56 1237 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 SMG5Q9UPR3 1016 aaKnown RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 IFRD1O00458 451 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 SLC5A3P53794 718 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 PRSS55Q6UWB4 352 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 DDIASQ8IXT1 998 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 ZFP14Q9HCL3 533 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 IL23AQ9NPF7 189 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 CASS4Q9NQ75 786 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 UBP1Q9NZI7 540 aa10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
SRGAP2-217ENST00000624873 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 H2AFYO75367 372 aaKnown RBP10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 GJB6O95452 261 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 FAM163BP0C2L3 166 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 MYH3P11055 1940 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 RPL17P18621 184 aaKnown RBP10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 MSH3P20585 1137 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 KDELR1P24390 212 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 CSE1LP55060 971 aaKnown RBP10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 MTM1Q13496 603 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 SPATA24Q86W54 205 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 HOMEZQ8IX15 550 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 KATNAL2Q8IYT4 538 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 ZDHHC6Q9H6R6 413 aa10.46□□□□□ -0.74
SRGAP2-217ENST00000624873 CYLDQ9NQC7 956 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms