RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 DAB1O75553 588 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 HOXB2P14652 356 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 DPP6P42658 865 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 ELF2Q15723 593 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 CSRP2Q16527 193 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 TRIM72Q6ZMU5 477 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 APTXQ7Z2E3 356 aaKnown RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 CHPFQ8IZ52 775 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 AHI1Q8N157 1196 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 PGAP3Q96FM1 320 aaPredicted RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 ELOVL2Q9NXB9 296 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 SLC12A6Q9UHW9 1150 aa12.92□□□□□ -0.34
LINC00963-217ENST00000624009 NOCTQ9UK39 431 aaKnown RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 MUC22E2RYF6 1773 aaPredicted RBP12.92□□□□□ -0.34
LINC00963-217ENST00000624009 NUMA1Q14980 2115 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 CHD5Q8TDI0 1954 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 A0A1W2PQF6 199 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 ZNF217O75362 1048 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 CCR1P32246 355 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 NOS2P35228 1153 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 SOX5P35711 763 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 P2RY2P41231 377 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 STAT1P42224 750 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 MATKP42679 507 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 POLR2FP61218 127 aaKnown RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 CDR2Q01850 454 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 STARD3Q14849 445 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 GEN1Q17RS7 908 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 DCAF6Q58WW2 860 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 TTC39BQ5VTQ0 682 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 PMS2CLQ68D20 193 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 FAM183BPQ6ZVS7 135 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 ATP6V0D2Q8N8Y2 350 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 KDM1BQ8NB78 822 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 FIBINQ8TAL6 211 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 BHMTQ93088 406 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 DUSP15Q9H1R2 295 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 PDCL3Q9H2J4 239 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 FBRSQ9HAH7 460 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 FAM207AQ9NSI2 230 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-217ENST00000624009 MYO6Q9UM54 1294 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 PAXBP1Q9Y5B6 917 aa12.91□□□□□ -0.34
LINC00963-217ENST00000624009 TCRBV21S2A2A0A5A6 115 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 KCNU1A8MYU2 1149 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 F9P00740 461 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 ERBB2P04626 1255 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 ZNF806P0C7X5 589 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 PNMA6AP0CW24 399 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 ABCB4P21439 1286 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 HLA-FP30511 346 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 SLC6A4P31645 630 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 OXCT1P55809 520 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 NOMO3P69849 1222 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 UBXN1Q04323 297 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 SYCP1Q15431 976 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 PLA2G2CQ5R387 149 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 CAVIN1Q6NZI2 390 aaKnown RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 NOP9Q86U38 636 aaKnown RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 KBTBD6Q86V97 674 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 KIAA2013Q8IYS2 634 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 DCLK2Q8N568 766 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 NEK11Q8NG66 645 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 FUCA2Q9BTY2 467 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00963-217ENST00000624009 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 CLEC4EQ9ULY5 219 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 STAP1Q9ULZ2 295 aa12.9□□□□□ -0.34
LINC00963-217ENST00000624009 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 TBL1XO60907 577 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ASLP04424 464 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 ATP5BP06576 529 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 DLDP09622 509 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 PABPC1P11940 636 aaKnown RBP12.89□□□□□ -0.35
LINC00963-217ENST00000624009 GABRG2P18507 467 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 HOXC13P31276 330 aa12.89□□□□□ -0.35
LINC00963-217ENST00000624009 HOXD12P35452 270 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms