RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 XPO6Q96QU8 1125 aaKnown RBP19.26■□□□□ 0.67
CIRBP-245ENST00000621399 PACSIN1Q9BY11 444 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 ARHGEF38Q9NXL2 777 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 PLK2Q9NYY3 685 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 SIT1Q9Y3P8 196 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 MTF2Q9Y483 593 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-245ENST00000621399 TECTAO75443 2155 aa19.26■□□□□ 0.67
CIRBP-245ENST00000621399 PRR33A8MZF0 331 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 PAGE1O75459 146 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 PENKP01210 267 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 FECHP22830 423 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 TARSP26639 723 aaKnown RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 SLC6A4P31645 630 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 CYLC1P35663 651 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 OPRD1P41143 372 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 OGDHQ02218 1023 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 RAB6CQ53S08 254 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 FYB2Q5VWT5 728 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 CWF19L1Q69YN2 538 aaKnown RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 C12orf40Q86WS4 652 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 CHSY1Q86X52 802 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 FBXL6Q8N531 539 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 PJA1Q8NG27 643 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 BAG1Q99933 345 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 NUP85Q9BW27 656 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 RAB6CQ9H0N0 254 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 FBRSL1Q9HCM7 1045 aaKnown RBP19.25■□□□□ 0.67
CIRBP-245ENST00000621399 COL4A2P08572 1712 aa19.25■□□□□ 0.67
CIRBP-245ENST00000621399 COL4A3Q01955 1670 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 GFRA2O00451 464 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 NCAM2O15394 837 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 TACR2P21452 398 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 EIF2DP41214 584 aaKnown RBP19.24■□□□□ 0.67
CIRBP-245ENST00000621399 MRE11P49959 708 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 CLCN5P51795 746 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 HDAC4P56524 1084 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 GSDMDP57764 484 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 SPA17Q15506 151 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 ARL13BQ3SXY8 428 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 TMEM196Q5HYL7 178 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 MS4A13Q5J8X5 152 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 C10orf76Q5T2E6 689 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 PIK3R6Q5UE93 754 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 ASTLQ6HA08 431 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-245ENST00000621399 SCYL2Q6P3W7 929 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
CIRBP-245ENST00000621399 ETFBKMTQ8IXQ9 262 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 LGI2Q8N0V4 545 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 FNIP1Q8TF40 1166 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 P2RY11Q96G91 374 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 PNKPQ96T60 521 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 OSBPL6Q9BZF3 934 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 IRX2Q9BZI1 471 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-245ENST00000621399 TRIM7Q9C029 511 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 SIK2Q9H0K1 926 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 ANLNQ9NQW6 1124 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 DNAJC17Q9NVM6 304 aaKnown RBP19.24■□□□□ 0.67
CIRBP-245ENST00000621399 CTTNBP2NLQ9P2B4 639 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 DEC1Q9P2X7 70 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 HS3ST4Q9Y661 456 aa19.24■□□□□ 0.67
CIRBP-245ENST00000621399 TYW5A2RUC4 315 aaKnown RBP19.23■□□□□ 0.67
CIRBP-245ENST00000621399 SOWAHDA6NJG2 315 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 F5H5T6 163 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 CACNG3O60359 315 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 TBL1XO60907 577 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 TULP3O75386 442 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 TMEM253P0C7T8 217 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 AOC1P19801 751 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 HJURPQ8NCD3 748 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-245ENST00000621399 LMAN1LQ9HAT1 526 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 TMPRSS4Q9NRS4 437 aa19.23■□□□□ 0.67
CIRBP-245ENST00000621399 EPN1Q9Y6I3 576 aaPredicted RBP19.23■□□□□ 0.67
CIRBP-245ENST00000621399 EIF3CLB5ME19 914 aaKnown RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 I6L893 689 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 PI15O43692 258 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 RNF8O76064 485 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 LCA5LO95447 670 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 DCNP07585 359 aaKnown RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 DRD1P21728 446 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 ADRA1BP35368 520 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 MAGEA1P43355 309 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 SGSHP51688 502 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 KDSRQ06136 332 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 AUHQ13825 339 aaKnown RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 LRRC32Q14392 662 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 PREPLQ4J6C6 727 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 MPP7Q5T2T1 576 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 GRAMD4Q6IC98 578 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 FSTL4Q6MZW2 842 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 CCDC105Q8IYK2 499 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 ZNF687Q8N1G0 1237 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 CFAP52Q8N1V2 620 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 MYEOVQ96EZ4 313 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 PRICKLE1Q96MT3 831 aaPredicted RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 HAPLN3Q96S86 360 aa19.22■□□□□ 0.67
CIRBP-245ENST00000621399 EIF3CQ99613 913 aaKnown RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 PRMT1Q99873 361 aaKnown RBP19.22■□□□□ 0.67
CIRBP-245ENST00000621399 ARHGEF4Q9NR80 690 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms