RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 STAT1P42224 750 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 SLC11A2P49281 568 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 ZNF445P59923 1031 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 PITX1P78337 314 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 HSF5Q4G112 596 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 DCAF6Q58WW2 860 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 EFHC1Q5JVL4 640 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 PSAPL1Q6NUJ1 521 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 SLC2A13Q96QE2 648 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 ASNSD1Q9NWL6 643 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 STOML2Q9UJZ1 356 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 NOCTQ9UK39 431 aaKnown RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 SGK1O00141 431 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 ACSL4O60488 711 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 DAB1O75553 588 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 TRUB2O95900 331 aaKnown RBP16.61■□□□□ 0.25
BRCA1-228ENST00000618469 APOEP02649 317 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 GLI1P08151 1106 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 ZNF806P0C7X5 589 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 HOXD9P28356 352 aaPredicted RBP16.61■□□□□ 0.25
BRCA1-228ENST00000618469 NOMO3P69849 1222 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 SHC2P98077 582 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 CRY1Q16526 586 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 FAM133BQ5BKY9 247 aaKnown RBP16.61■□□□□ 0.25
BRCA1-228ENST00000618469 EOGTQ5NDL2 527 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 EGFLAMQ63HQ2 1017 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 ANO7Q6IWH7 933 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 TRMT11Q7Z4G4 463 aaKnown RBP16.61■□□□□ 0.25
BRCA1-228ENST00000618469 DEFB106AQ8N104 65 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 CAMKK1Q8N5S9 505 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 MSANTD4Q8NCY6 345 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 ZMIZ1Q9ULJ6 1067 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 ATRXP46100 2492 aa16.61■□□□□ 0.25
BRCA1-228ENST00000618469 FAM208BQ5VWN6 2430 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 GOLGA6L7A0A1B0GV03 622 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 PRRT4C9JH25 899 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 TEX33O43247 280 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ADAM23O75077 832 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 TOP3BO95985 862 aaKnown RBP16.6■□□□□ 0.25
BRCA1-228ENST00000618469 IGLV3-25P01717 112 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 PROS1P07225 676 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CISD3P0C7P0 127 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 HNRNPLP14866 589 aaKnown RBP eCLIP16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SLC6A4P31645 630 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SGSHP51688 502 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CDK17Q00537 523 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CDR2Q01850 454 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SLC6A3Q01959 620 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ARID5AQ03989 594 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 IQCB1Q15051 598 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 FILIP1LQ4L180 1135 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 C2CD6Q53TS8 623 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 NADSYN1Q6IA69 706 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 TMEM92Q6UXU6 159 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ERICH1Q86X53 443 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 ZDHHC17Q8IUH5 632 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SLC39A13Q96H72 371 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 PRICKLE1Q96MT3 831 aaPredicted RBP16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 DDIT4Q9NX09 232 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 FBXO10Q9UK96 956 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CLEC4EQ9ULY5 219 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 SLC27A6Q9Y2P4 619 aa16.6■□□□□ 0.25
BRCA1-228ENST00000618469 CCDC163A0A0D9SF12 145 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 GFRA2O00451 464 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 RPP40O75818 363 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 HOXB2P14652 356 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 WASP42768 502 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 DGKEP52429 567 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 LIMK1P53667 647 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 FMO1Q01740 532 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 FOXC1Q12948 553 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 GEN1Q17RS7 908 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 ZC3H12AQ5D1E8 599 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 FAM102AQ5T9C2 384 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 LUZP1Q86V48 1076 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 CHPFQ8IZ52 775 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 HJURPQ8NCD3 748 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 GAB3Q8WWW8 586 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 CPA5Q8WXQ8 436 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
BRCA1-228ENST00000618469 NUCKS1Q9H1E3 243 aaKnown RBP16.59■□□□□ 0.25
BRCA1-228ENST00000618469 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms