RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ARSEP51690 589 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 ERVFC1P60507 584 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 OTUD4Q01804 1114 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 DUSP4Q13115 394 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 XRCC4Q13426 336 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 HSP90B2PQ58FF3 399 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 TTC27Q6P3X3 843 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 DARS2Q6PI48 645 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 HFE2Q6ZVN8 426 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 BNIPLQ7Z465 357 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 SCAMP5Q8TAC9 235 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 ACTL9Q8TC94 416 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 DQX1Q8TE96 717 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 AENQ8WTP8 325 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 ATG4AQ8WYN0 398 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 B3GALT6Q96L58 329 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 TRIM31Q9BZY9 425 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 IL37Q9NZH6 218 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
TRAPPC3-210ENST00000617904 HACD1B0YJ81 288 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 PER2O15055 1255 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 EFEMP2O95967 443 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 APOEP02649 317 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 SERPINB6P35237 376 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 KCNJ1P48048 391 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 CARSP49589 748 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TPI1P60174 286 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 MRPS25P82663 173 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 RAB33AQ14088 237 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 PPP2R5DQ14738 602 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 SLMAPQ14BN4 828 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 ITIH5Q86UX2 942 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TMEM173Q86WV6 379 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 VN1R2Q8NFZ6 395 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 MICAL1Q8TDZ2 1067 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 BCL7CQ8WUZ0 217 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 HAPLN3Q96S86 360 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TRIM51Q9BSJ1 452 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TLE6Q9H808 572 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 PIGVQ9NUD9 493 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 TMEM30AQ9NV96 361 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 GPATCH2LQ9NWQ4 482 aa17.36■□□□□ 0.37
TRAPPC3-210ENST00000617904 MUC6Q6W4X9 2439 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 A0A1W2PQH9 124 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 ESYT3A0FGR9 886 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SLC38A8A6NNN8 435 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 NCAM2O15394 837 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 RBP3P10745 1247 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CDR1P51861 262 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 EPHB3P54753 998 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CASP8Q14790 479 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SPDYCQ5MJ68 293 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CFAP58Q5T655 872 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SLC9A4Q6AI14 798 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 MSANTD2Q6P1R3 559 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CYP4V2Q6ZWL3 525 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 TAS1R1Q7RTX1 841 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 ALLCQ8N6M5 410 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CCDC185Q8N715 623 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 ATP6V0D2Q8N8Y2 350 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SLC35B2Q8TB61 432 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 NACA2Q9H009 215 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 BRD8Q9H0E9 1235 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 OSBPL2Q9H1P3 480 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 CYP4F11Q9HBI6 524 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 PCDH9Q9HC56 1237 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 ANAPC5Q9UJX4 755 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 DNPEPQ9ULA0 475 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 LZTS1Q9Y250 596 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SLC27A5Q9Y2P5 690 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 SNX24Q9Y343 169 aa17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 USP15Q9Y4E8 981 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC3-210ENST00000617904 PATJQ8NI35 1801 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 C5orf42Q9H799 3197 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 FAM92AA1XBS5 289 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 WDR27A2RRH5 827 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 LOC730098B7Z3J9 87 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 PPP1R12AO14974 1030 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 IRAK2O43187 625 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 CREB3O43889 395 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 SEC31AO94979 1220 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 FYNP06241 537 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 CD48P09326 243 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 TFE3P19532 575 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 PLTPP55058 493 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 COG7P83436 770 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 DUSP6Q16828 381 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 ALS2CLQ60I27 953 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 ELMSAN1Q6PJG2 1045 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 LRRC31Q6UY01 552 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 CCDC149Q6ZUS6 474 aa17.34■□□□□ 0.37
TRAPPC3-210ENST00000617904 TAC4Q86UU9 113 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms