RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PABPC1P11940 636 aaKnown RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 HLA-FP30511 346 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 GNA15P30679 374 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 MTA1Q13330 715 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 FIBINQ8TAL6 211 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 NOX5Q96PH1 765 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 SLC4A5Q9BY07 1137 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 MKRN2Q9H000 416 aaKnown RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 POPDC2Q9HBU9 364 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 ABCB8Q9NUT2 735 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 USP36Q9P275 1121 aaKnown RBP10.06□□□□□ -0.8
TARDBP-218ENST00000617172 SUN2Q9UH99 717 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 SLC12A6Q9UHW9 1150 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 DACH1Q9UI36 760 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 GGA2Q9UJY4 613 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 CLEC4EQ9ULY5 219 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
TARDBP-218ENST00000617172 UPK3BL1B0FP48 263 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 UPK3BL2E5RIL1 263 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 TBL1XO60907 577 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 IGLV3-19P01714 112 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 FYNP06241 537 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 GLI1P08151 1106 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 DLDP09622 509 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 C7P10643 843 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SLC2A3P11169 496 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 ENGP17813 658 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 POLR2EP19388 210 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 PON1P27169 355 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 ERCC5P28715 1186 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 MTIF2P46199 727 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 NOVA1P51513 510 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 TPMTP51580 245 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 BPIFB4P59827 614 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 YWHAZP63104 245 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SHC2P98077 582 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 PTK2Q05397 1052 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 ZBTB16Q05516 673 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 FNDC3BQ53EP0 1204 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 N4BP2L1Q5TBK1 243 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 DENND1BQ6P3S1 775 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 CHST9Q7L1S5 443 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 ADIPOR2Q86V24 386 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 IRF2BP1Q8IU81 584 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SLC41A1Q8IVJ1 513 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 HDDC3Q8N4P3 179 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 HJURPQ8NCD3 748 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 OR2T3Q8NH03 318 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 DQX1Q8TE96 717 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 CLEC4CQ8WTT0 213 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 DNASE2BQ8WZ79 361 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SHC3Q92529 594 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 TOE1Q96GM8 510 aaKnown RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SLC39A13Q96H72 371 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 HSPA12BQ96MM6 686 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 ZDHHC5Q9C0B5 715 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 PCED1AQ9H1Q7 454 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 LHX5Q9H2C1 402 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 SLC32A1Q9H598 525 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 CAPN10Q9HC96 672 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 WSB2Q9NYS7 404 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-218ENST00000617172 NAALADL1Q9UQQ1 740 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
TARDBP-218ENST00000617172 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 PAPSS1O43252 624 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 CALCAP01258 141 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 APOEP02649 317 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ASLP04424 464 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SLC9A1P19634 815 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 PRKCHP24723 683 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 PMLP29590 882 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 KRT9P35527 623 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 USP8P40818 1118 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 COPAP53621 1224 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ST8SIA6P61647 398 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SFSWAPQ12872 951 aaKnown RBP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SLC14A1Q13336 389 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 HNRNPDQ14103 355 aaKnown RBP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 MAN2A1Q16706 1144 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 ARHGAP44Q17R89 818 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 UAP1L1Q3KQV9 507 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 FAM133BQ5BKY9 247 aaKnown RBP10.04□□□□□ -0.8
TARDBP-218ENST00000617172 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 SH3PXD2AQ5TCZ1 1133 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 MBLAC2Q68D91 279 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 RFWD3Q6PCD5 774 aa10.04□□□□□ -0.8
TARDBP-218ENST00000617172 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms