RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 OMDQ99983 421 aa12.1□□□□□ -0.47
CDH5-208ENST00000614547 C20orf27Q9GZN8 174 aa12.1□□□□□ -0.47
CDH5-208ENST00000614547 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
CDH5-208ENST00000614547 TMEM216Q9P0N5 145 aa12.1□□□□□ -0.47
CDH5-208ENST00000614547 COQ4Q9Y3A0 265 aa12.1□□□□□ -0.47
CDH5-208ENST00000614547 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 CRTAMO95727 393 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 THRAP10827 490 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 EEF1DP29692 281 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 RAP1GDS1P52306 607 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 RALGDSQ12967 914 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 KLF10Q13118 480 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 TLR1Q15399 786 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 DGKDQ16760 1214 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 FBXW8Q8N3Y1 598 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ZNF781Q8N8C0 355 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 CIB1Q99828 191 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 MRPL4Q9BYD3 311 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 CCDC90BQ9GZT6 254 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 UPF3AQ9H1J1 476 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 RGS17Q9UGC6 210 aaPredicted RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 XRCC1P18887 633 aaPredicted RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 MPSTP25325 297 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ABCE1P61221 599 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 PLIN5Q00G26 463 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 GBE1Q04446 702 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 FOXD4Q12950 439 aaPredicted RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 LSAMPQ13449 338 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 MYBPC3Q14896 1274 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 TRAPPC12Q8WVT3 735 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 C7orf26Q96N11 449 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 TLE6Q9H808 572 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 PIGNO95427 931 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ERBB2P04626 1255 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 CCR10P46092 362 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 TMED10P49755 219 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 IDH3AP50213 366 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 WASHC5Q12768 1159 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 OLIG2Q13516 323 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 FAM47CQ5HY64 1035 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 ACOT1Q86TX2 421 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 LGMNQ99538 433 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 WDR41Q9HAD4 459 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 TBC1D23Q9NUY8 699 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 BFARQ9NZS9 450 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 RBMX2Q9Y388 322 aaKnown RBP12.09□□□□□ -0.47
CDH5-208ENST00000614547 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
CDH5-208ENST00000614547 A0A096LPK6 155 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 TSPAN8P19075 237 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 CYP2F1P24903 491 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 MAP4P27816 1152 aaKnown RBP12.08□□□□□ -0.47
CDH5-208ENST00000614547 CRABP2P29373 138 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 CAP2P40123 477 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.47
CDH5-208ENST00000614547 CCNIQ14094 377 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 MTX3Q5HYI7 312 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 TMC7Q7Z402 723 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 GPR141Q7Z602 305 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 TSC22D4Q9Y3Q8 395 aa12.08□□□□□ -0.47
CDH5-208ENST00000614547 YDJCA8MPS7 323 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 C9JVG2 144 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ITGAXP20702 1163 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 CSE1LP55060 971 aaKnown RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 CXCL9Q07325 125 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 PTP4A2Q12974 167 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 GLRA4Q5JXX5 417 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ARL10Q8N8L6 244 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 CCDC138Q96M89 665 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 GPAMQ9HCL2 828 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 IARS2Q9NSE4 1012 aaKnown RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 SH3BP1Q9Y3L3 701 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 MICAL2O94851 1124 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 METTL18O95568 372 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 NR4A1P22736 598 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ME2P23368 584 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 THOP1P52888 689 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 ATXN1P54253 815 aaKnown RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 INHBCP55103 352 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
CDH5-208ENST00000614547 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
CDH5-208ENST00000614547 PITRM1Q5JRX3 1037 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms