RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ACBD5Q5T8D3 534 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 FAM102AQ5T9C2 384 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 EGFLAMQ63HQ2 1017 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 LRSAM1Q6UWE0 723 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SERPINA13PQ6UXR4 307 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SLC36A4Q6YBV0 504 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 C12orf50Q8NA57 414 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 MDGA1Q8NFP4 955 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 EPS8L1Q8TE68 723 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 GANQ9H2C0 597 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ELOVL2Q9NXB9 296 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 STIM2Q9P246 746 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PCDHGA5Q9Y5G8 931 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ANKRD62A6NC57 917 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PRR5-ARHGAP8B1AHC4 643 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 M0QYT0 321 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 TRIM24O15164 1050 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 GRAP2O75791 330 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ERBB2P04626 1255 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PABPC1P11940 636 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ZNF18P17022 549 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 HOXD9P28356 352 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 MATKP42679 507 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 NSFP46459 744 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ARHGAP8P85298 464 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 CDR2Q01850 454 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 NME3Q13232 169 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 FNDC3BQ53EP0 1204 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PIK3R6Q5UE93 754 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SYPL2Q5VXT5 272 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 RNF219Q5W0B1 726 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 OLFML1Q6UWY5 402 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 CARNMT1Q8N4J0 409 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 WDTC1Q8N5D0 677 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 ZNF397Q8NF99 534 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SLC2A13Q96QE2 648 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 GGA2Q9UJY4 613 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SIK3Q9Y2K2 1263 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
CBWD3-208ENST00000612050 SYCE3A1L190 88 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 FYNP06241 537 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 TPM3P06753 285 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 MMEP08473 750 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 ACADMP11310 421 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 FERP16591 822 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 NNMTP40261 264 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 SULT1E1P49888 294 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 MESP2Q0VG99 397 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 GEN1Q17RS7 908 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 MS4A13Q5J8X5 152 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 NAA35Q5VZE5 725 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 RFWD3Q6PCD5 774 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 LGI2Q8N0V4 545 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 SLC39A13Q96H72 371 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 GABRG3Q99928 467 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 WDCPQ9H6R7 721 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 POLR3BQ9NW08 1133 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
CBWD3-208ENST00000612050 KIAA1522Q9P206 1035 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-208ENST00000612050 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 AP5Z1O43299 807 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 ADAM23O75077 832 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 NDUFS2O75306 463 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 EPN2O95208 641 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 ASLP04424 464 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 TACR2P21452 398 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 GABRB2P47870 512 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 KLK7P49862 253 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 JAM2P57087 298 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 DEUP1Q05D60 604 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.37
CBWD3-208ENST00000612050 NCAPHQ15003 741 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 PLK5Q496M5 336 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 FAM133BQ5BKY9 247 aaKnown RBP12.77□□□□□ -0.37
CBWD3-208ENST00000612050 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms