RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 PTPN20Q4JDL3 420 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 TMEM215Q68D42 235 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 AOPEPQ8N6M6 819 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
TPGS2-220ENST00000610723 GANQ9H2C0 597 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 SMOC1Q9H4F8 434 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 FAM204AQ9H8W3 233 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 ABCB8Q9NUT2 735 aa17.09■□□□□ 0.33
TPGS2-220ENST00000610723 THAP10Q9P2Z0 257 aaPredicted RBP17.09■□□□□ 0.33
TPGS2-220ENST00000610723 LIMA1Q9UHB6 759 aaKnown RBP17.09■□□□□ 0.33
TPGS2-220ENST00000610723 XPO7Q9UIA9 1087 aaKnown RBP17.09■□□□□ 0.33
TPGS2-220ENST00000610723 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 PRR5-ARHGAP8B1AHC4 643 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 IRAK2O43187 625 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 HSF2BPO75031 334 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 GFPT2O94808 682 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 GLI1P08151 1106 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 HLA-FP30511 346 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 MPLP40238 635 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 IL12RB1P42701 662 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 ARHGAP8P85298 464 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 SLC6A3Q01959 620 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 BYSLQ13895 437 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 ZNF234Q14588 700 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 EIF4HQ15056 248 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 SF3A2Q15428 464 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 PMS2CLQ68D20 193 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 CHST9Q7L1S5 443 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 RNF34Q969K3 372 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 MYEOVQ96EZ4 313 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 SLC2A13Q96QE2 648 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 NUCKS1Q9H1E3 243 aaKnown RBP17.08■□□□□ 0.32
TPGS2-220ENST00000610723 SLC6A17Q9H1V8 727 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 DDIT4Q9NX09 232 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 ZNF292O60281 2723 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 WDR87Q6ZQQ6 2873 aa17.08■□□□□ 0.32
TPGS2-220ENST00000610723 TIMM44O43615 452 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 IGLV3-25P01717 112 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 NDUFV2P19404 249 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 DHPSP49366 369 aaPredicted RBP17.07■□□□□ 0.32
TPGS2-220ENST00000610723 STARD3Q14849 445 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 SYCP1Q15431 976 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 MAP7D1Q3KQU3 841 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 RAP1GAP2Q684P5 730 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 MFN1Q8IWA4 741 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 CFAP52Q8N1V2 620 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 CARNMT1Q8N4J0 409 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 ATP6V0D2Q8N8Y2 350 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 C12orf50Q8NA57 414 aaPredicted RBP17.07■□□□□ 0.32
TPGS2-220ENST00000610723 HJURPQ8NCD3 748 aaPredicted RBP17.07■□□□□ 0.32
TPGS2-220ENST00000610723 WFDC5Q8TCV5 224 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 WFIKKN2Q8TEU8 576 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 PRICKLE1Q96MT3 831 aaPredicted RBP17.07■□□□□ 0.32
TPGS2-220ENST00000610723 CD248Q9HCU0 757 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 MBD1Q9UIS9 605 aaPredicted RBP17.07■□□□□ 0.32
TPGS2-220ENST00000610723 GGA2Q9UJY4 613 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 PCDHGA5Q9Y5G8 931 aa17.07■□□□□ 0.32
TPGS2-220ENST00000610723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 NPC1O15118 1278 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 EPHB6O15197 1021 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 MMEP08473 750 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 PABPC1P11940 636 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 RNASE9P60153 205 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 RPS24P62847 133 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 UBXN1Q04323 297 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■■■□□ 15.3
TPGS2-220ENST00000610723 NCAPHQ15003 741 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 E2F5Q15329 346 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 MS4A13Q5J8X5 152 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 MPP7Q5T2T1 576 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 ARMCX6Q7L4S7 300 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 CHSY1Q86X52 802 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 TMEFF1Q8IYR6 380 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 AHI1Q8N157 1196 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 BTN2A3PQ96KV6 586 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 SPAG5Q96R06 1193 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 IRX2Q9BZI1 471 aaPredicted RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
TPGS2-220ENST00000610723 CDV3Q9UKY7 258 aaKnown RBP17.06■□□□□ 0.32
TPGS2-220ENST00000610723 SIK3Q9Y2K2 1263 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms