RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SCG2P13521 617 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CREB1P16220 341 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDH2P19022 906 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 RXRAP19793 462 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GARTP22102 1010 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 IGFBP6P24592 240 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC5A2P31639 672 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 HSPA13P48723 471 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GALCP54803 685 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 JAM2P57087 298 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 RPS3AP61247 264 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ATP6V0D1P61421 351 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDK16Q00536 496 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 MVKQ03426 396 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLCQ05315 142 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 BTKQ06187 659 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TROAPQ12815 778 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CALCOCO2Q13137 446 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 MSLNQ13421 630 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SNAPC2Q13487 334 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 THOC5Q13769 683 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LPIN1Q14693 890 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SF3B3Q15393 1217 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CNGA3Q16281 694 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYLK3Q32MK0 819 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZFYVE27Q5T4F4 411 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 OGFRL1Q5TC84 451 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC8BQ6P9F7 803 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 C16orf87Q6PH81 154 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 DCLRE1AQ6PJP8 1040 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 IZUMO2Q6UXV1 221 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LINC00299Q6ZSB3 139 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANO5Q75V66 913 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 OTOAQ7RTW8 1153 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 NANOGNBQ7Z5D8 188 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 MTDHQ86UE4 582 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SATL1Q86VE3 508 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CHSY1Q86X52 802 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMEM192Q8IY95 271 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC105Q8IYK2 499 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 C7orf61Q8IZ16 206 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 BLIDQ8IZY5 108 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LSMEM2Q8N112 164 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TTC39CQ8N584 583 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LZTR1Q8N653 840 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 MINDY2Q8NBR6 621 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 RBM15BQ8NDT2 890 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CATSPER1Q8NEC5 780 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 DDHD1Q8NEL9 900 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZCRB1Q8TBF4 217 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 FNIP1Q8TF40 1166 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF296Q8WUU4 475 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SREK1Q8WXA9 508 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 STARD8Q92502 1023 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CASP10Q92851 521 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GLG1Q92896 1179 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 BORCS5Q969J3 196 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ABTB1Q969K4 478 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 EME1Q96AY2 570 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CEP95Q96GE4 821 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CNDP2Q96KP4 475 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 OLFM1Q99784 485 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CTRCQ99895 268 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SH3GL1Q99961 368 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 PSD2Q9BQI7 771 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 HAUS8Q9BT25 410 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SYT11Q9BT88 431 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 PACSIN1Q9BY11 444 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 STK33Q9BYT3 514 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 NACAP1Q9BZK3 213 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 EBF3Q9H4W6 596 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 EHMT1Q9H9B1 1298 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 KCNK13Q9HB14 408 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SMPD4Q9NXE4 827 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 UBP1Q9NZI7 540 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 C6orf203Q9P0P8 240 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 IGSF9Q9P2J2 1179 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SRRDQ9UH36 339 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GNPTGQ9UJJ9 305 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF180Q9UJW8 692 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 NUDT5Q9UKK9 219 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 DNM3Q9UQ16 869 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 LZTS1Q9Y250 596 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 COQ6Q9Y2Z9 468 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SF3B6Q9Y3B4 125 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF711Q9Y462 761 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TNRQ92752 1358 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ASTN2O75129 1339 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF532Q9HCE3 1301 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD36CQ5JPF3 1778 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 B2RBV5 119 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NKRFO15226 690 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 KMOO15229 486 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 IDH3BO43837 385 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM189A1O60320 539 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CNOT3O75175 753 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPAG7O75391 227 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms