RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CHI3L2Q15782 390 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ALYREFQ86V81 257 aaKnown RBP12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SIX6OS1Q8N1H7 587 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC7A14Q8TBB6 771 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NCAPGQ9BPX3 1015 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PAAF1Q9BRP4 392 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MRPL42Q9Y6G3 142 aaKnown RBP12.16□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MYBPHLA2RUH7 354 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DIAPH2O60879 1101 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KRT38O76015 456 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CTSHP09668 335 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAP2K2P36507 400 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MLH1P40692 756 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 HSF5Q4G112 596 aaPredicted RBP12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 XKR4Q5GH76 650 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 LRRC39Q96DD0 335 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GAD1Q99259 594 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DDX43Q9NXZ2 648 aaKnown RBP12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MOCS1Q9NZB8 636 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF487B1APH4 448 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 I3L4J1 428 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ENTPD5O75356 428 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ATP5HO75947 161 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 AXLP30530 894 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 SLC8A3P57103 927 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 WASHC5Q12768 1159 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MAP2K5Q13163 448 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARCQ7LC44 396 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NUDCD3Q8IVD9 361 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARID3BQ8IVW6 561 aaPredicted RBP12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ZNF567Q8N184 647 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 RAB3IPQ96QF0 476 aaPredicted RBP12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 NPY6RQ99463 290 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 XAB2Q9HCS7 855 aaKnown RBP12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MIOSQ9NXC5 875 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MCM8Q9UJA3 840 aa12.15□□□□□ -0.46
HMGN3-AS1-201ENST00000604516 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 H0Y3Z8 333 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CAPN9O14815 690 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 NOS2P35228 1153 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CLCNKBP51801 687 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CRYBB1P53674 252 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PAN2Q504Q3 1202 aaKnown RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RFWD3Q6PCD5 774 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PID1Q7Z2X4 250 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 GPATCH11Q8N954 259 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TTC8Q8TAM2 541 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 EDEM1Q92611 657 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 E2F7Q96AV8 911 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SENP8Q96LD8 212 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 NMUR2Q9GZQ4 415 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SYBUQ9NX95 663 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 RALGAPA2Q2PPJ7 1873 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 C17orf102A2RUQ5 167 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SDR42E2A6NKP2 422 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 HAS3O00219 553 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 EEF2KO00418 725 aaKnown RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 HAUS5O94927 633 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 WARSP23381 471 aaKnown RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CCND1P24385 295 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CPA2P48052 419 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 MORN1Q5T089 497 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ZNF398Q8TD17 642 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 INPP5DQ92835 1189 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ATXN7L3BQ96GX2 97 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 EBF2Q9HAK2 575 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 DAB1O75553 588 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 ALDOAP04075 364 aaKnown RBP12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 NCAM1P13591 858 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PTPN4P29074 926 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 SCNN1AP37088 669 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 CDK16Q00536 496 aa12.14□□□□□ -0.47
HMGN3-AS1-201ENST00000604516 PARP6Q2NL67 630 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms