RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 A0A1W2PQF6 199 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 TYW5A2RUC4 315 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 NPC1O15118 1278 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 TIMM44O43615 452 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 LRP3O75074 770 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 RHOBTB1O94844 696 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 MMEP08473 750 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 ATP1A3P13637 1013 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 SOX5P35711 763 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 STAT1P42224 750 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 SGSHP51688 502 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 JAM2P57087 298 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 PITX1P78337 314 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 ARID5AQ03989 594 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 PLK5Q496M5 336 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 SLC26A9Q7LBE3 791 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 ERICH1Q86X53 443 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 ZNF677Q86XU0 584 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 HJURPQ8NCD3 748 aaPredicted RBP22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 MSANTD4Q8NCY6 345 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 RNF34Q969K3 372 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 C18orf8Q96DM3 657 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 DDIT4Q9NX09 232 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 STIM2Q9P246 746 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 STON1Q9Y6Q2 735 aa22.71■■□□□ 1.23
PPFIA3-208ENST00000602726 CEP250Q9BV73 2442 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 SYNJ2BP-COX16A0A087WUM0 186 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 SLC2A3P11169 496 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 KLHL40Q2TBA0 621 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 APTXQ7Z2E3 356 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ATP6V0D2Q8N8Y2 350 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ZNF557Q8N988 423 aaPredicted RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ZNF397Q8NF99 534 aaPredicted RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 OLIG1Q8TAK6 271 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 WFIKKN2Q8TEU8 576 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ERLEC1Q96DZ1 483 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 BTN2A3PQ96KV6 586 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ERGIC2Q96RQ1 377 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 NUCKS1Q9H1E3 243 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 DUSP15Q9H1R2 295 aaPredicted RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 PARD6AQ9NPB6 346 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 ABCB8Q9NUT2 735 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 COX16Q9P0S2 106 aa22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 THAP10Q9P2Z0 257 aaPredicted RBP22.7■■□□□ 1.22
PPFIA3-208ENST00000602726 FAM170AA1A519 330 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 WASH3PC4AMC7 463 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 DAB1O75553 588 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 TGM1P22735 817 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 HLA-FP30511 346 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 GABRB2P47870 512 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 ZNF165P49910 485 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 RNASE9P60153 205 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 CDR2Q01850 454 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 BYSLQ13895 437 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 MS4A13Q5J8X5 152 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 KIAA1211LQ6NV74 962 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 CCDC117Q8IWD4 279 aaPredicted RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 DHX40Q8IX18 779 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 SLC20A1Q8WUM9 679 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 RLN3Q8WXF3 142 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 CPA5Q8WXQ8 436 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 SPACA7Q96KW9 195 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 XPO7Q9UIA9 1087 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 GGA2Q9UJY4 613 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 NOCTQ9UK39 431 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 RAD54BQ9Y620 910 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 RALGAPA1Q6GYQ0 2036 aa22.69■■□□□ 1.22
PPFIA3-208ENST00000602726 EPN2O95208 641 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 PABPC1P11940 636 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 GABRG2P18507 467 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 ABCB4P21439 1286 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 CCR1P32246 355 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 NOS2P35228 1153 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 P2RY2P41231 377 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 NME3Q13232 169 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 EIF4EBP2Q13542 120 aaPredicted RBP22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 STARD3Q14849 445 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 FAM102AQ5T9C2 384 aaPredicted RBP22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 NAA35Q5VZE5 725 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 RAP1GAP2Q684P5 730 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 TMEM215Q68D42 235 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 CHST9Q7L1S5 443 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 CHSY1Q86X52 802 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 MFN1Q8IWA4 741 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 ABCA7Q8IZY2 2146 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 AHI1Q8N157 1196 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 SORCS1Q8WY21 1168 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 PRICKLE1Q96MT3 831 aaPredicted RBP22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 ARRDC1-AS1Q9H2J1 176 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 SEMA4GQ9NTN9 838 aa22.68■■□□□ 1.22
PPFIA3-208ENST00000602726 KCNU1A8MYU2 1149 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 MAP3K13O43283 966 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 PTMSP20962 102 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 TACR2P21452 398 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 MATKP42679 507 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 IL12RB1P42701 662 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 RPS24P62847 133 aaKnown RBP22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 NOMO3P69849 1222 aa22.67■■□□□ 1.22
PPFIA3-208ENST00000602726 LMNB2Q03252 620 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms