RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C2orf78A6NCI8 922 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 CLASP2O75122 1294 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 MOCS2O96007 188 aaPredicted RBP17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 EPHB3P54753 998 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 SCAPQ12770 1279 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 CYP1B1Q16678 543 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 FAM182AQ5T1J6 154 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 BBS12Q6ZW61 710 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 MAATS1Q7Z4T9 603 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 RBM23Q86U06 439 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 NETO2Q8NC67 525 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 SEC14L1Q92503 715 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 MAGOHBQ96A72 148 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 LRRC45Q96CN5 670 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 FAF2Q96CS3 445 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 TRMT2BQ96GJ1 504 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 NCAPGQ9BPX3 1015 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 RABEP2Q9H5N1 569 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 TMBIM4Q9HC24 238 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 MAN1C1Q9NR34 630 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 NFS1Q9Y697 457 aa17.95■□□□□ 0.46
PPFIA3-207ENST00000602716 GOLGA6L10A0A0M3HER8 536 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 CCL16O15467 120 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 TTI1O43156 1089 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 MAP3K6O95382 1288 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 HMBSP08397 361 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 SEMA3BQ13214 749 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 PDK2Q15119 407 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 ANKRD20A8PQ5CZ79 823 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 EFHC2Q5JST6 749 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 CEP85LQ5SZL2 805 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 ARTNQ5T4W7 220 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 B4GALNT4Q76KP1 1039 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 TMC8Q8IU68 726 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 PLD5Q8N7P1 536 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 PPM1EQ8WY54 764 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 RNF34Q969K3 372 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 RNF157Q96PX1 679 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 ZNF670Q9BS34 389 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 TRIM51Q9BSJ1 452 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 WDCPQ9H6R7 721 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 C10orf88Q9H8K7 445 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 ARHGEF38Q9NXL2 777 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 MARCH2Q9P0N8 246 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 CREB3O43889 395 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 F9P00740 461 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 C12orf50Q8NA57 414 aaPredicted RBP17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 CCDC26Q8TAB7 109 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC39A13Q96H72 371 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 SERPINB11Q96P15 392 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 LRRC3Q9BY71 257 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 HCFC1R1Q9NWW0 138 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 NEU3Q9UQ49 428 aa17.94■□□□□ 0.46
PPFIA3-207ENST00000602716 COCHO43405 550 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 LSP1P33241 339 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 PSEN1P49768 467 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 TAF12Q16514 161 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 CCDC33Q8N5R6 958 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC22A12Q96S37 553 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 DNPEPQ9ULA0 475 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 MAFFQ9ULX9 164 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 FAM169AQ9Y6X4 670 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 A0A087WUV0 522 aaPredicted RBP17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC12A8A0AV02 714 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 TJP3O95049 919 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 LRG1P02750 347 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 F11P03951 625 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 GJA1P17302 382 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 AMPD1P23109 780 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 CETN2P41208 172 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 PTGIRP43119 386 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 TBX4P57082 545 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 CYP4F8P98187 520 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 OTUD4Q01804 1114 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 GUCY1A3Q02108 690 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 ZNF697Q5TEC3 545 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 SNX30Q5VWJ9 437 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 CCDC137Q6PK04 289 aaKnown RBP17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 GAREM2Q75VX8 874 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 ACTL9Q8TC94 416 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 ARHGEF4Q9NR80 690 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 MSRAQ9UJ68 235 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 TLR6Q9Y2C9 796 aa17.93■□□□□ 0.46
PPFIA3-207ENST00000602716 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 KCNU1A8MYU2 1149 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 NDUFAB1O14561 156 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 DAPK3O43293 454 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 PAGE1O75459 146 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 GBP1P32455 592 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 KCNQ1P51787 676 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 ZNF844Q08AG5 666 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 RAB30Q15771 203 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 CLUL1Q15846 466 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 STXBP5Q5T5C0 1151 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC9A4Q6AI14 798 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 C1orf228Q6PIY5 440 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 CCDC149Q6ZUS6 474 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms