RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	SULT1E1	P49888	294 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	DMWD	Q09019	674 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	SLC25A52	Q3SY17	297 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	MS4A13	Q5J8X5	152 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	MPP7	Q5T2T1	576 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	HGSNAT	Q68CP4	663 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	PHLDB2	Q86SQ0	1253 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	FAM122A	Q96E09	287 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	PRMT1	Q99873	361 aa	Known RBP	27.82	■■■□□ 2.04
USF2-215	ENST00000602164	FAM126A	Q9BYI3	521 aa	Predicted RBP	27.82	■■■□□ 2.04
USF2-215	ENST00000602164	TAS2R14	Q9NYV8	317 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	COX16	Q9P0S2	106 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164		R4GN57	208 aa		27.82	■■■□□ 2.04
USF2-215	ENST00000602164	PROB1	E7EW31	1015 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	CALB1	P05937	261 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	SLC2A3	P11169	496 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	TIE1	P35590	1138 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	CXCR3	P49682	368 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	ZBED6	P86452	979 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	C1QBP	Q07021	282 aa	Known RBP	27.81	■■■□□ 2.04
USF2-215	ENST00000602164	NME3	Q13232	169 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	DMC1	Q14565	340 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	ACAD10	Q6JQN1	1059 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	ALLC	Q8N6M5	410 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	EMC1	Q8N766	993 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	JOSD2	Q8TAC2	188 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	SYN2	Q92777	582 aa	Predicted RBP	27.81	■■■□□ 2.04
USF2-215	ENST00000602164	DDX50	Q9BQ39	737 aa	Known RBP	27.81	■■■□□ 2.04
USF2-215	ENST00000602164	ZDHHC4	Q9NPG8	344 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	ZSCAN32	Q9NX65	697 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164	MMP17	Q9ULZ9	603 aa		27.81	■■■□□ 2.04
USF2-215	ENST00000602164		I6L893	689 aa	Predicted RBP	27.8	■■■□□ 2.04
USF2-215	ENST00000602164	LILRB5	O75023	590 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	GJB6	O95452	261 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	TPM3	P06753	285 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	SKIL	P12757	684 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	TNFAIP3	P21580	790 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	KLHL30	Q0D2K2	578 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	GEN1	Q17RS7	908 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	HSF5	Q4G112	596 aa	Predicted RBP	27.8	■■■□□ 2.04
USF2-215	ENST00000602164	CCDC33	Q8N5R6	958 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	ATP6V0D2	Q8N8Y2	350 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	HJURP	Q8NCD3	748 aa	Predicted RBP	27.8	■■■□□ 2.04
USF2-215	ENST00000602164	C3orf20	Q8ND61	904 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	WFDC5	Q8TCV5	224 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	KCNV2	Q8TDN2	545 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	CFAP57	Q96MR6	1250 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	ANLN	Q9NQW6	1124 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	PCDHGA2	Q9Y5H1	932 aa		27.8	■■■□□ 2.04
USF2-215	ENST00000602164	DDX3X	O00571	662 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
USF2-215	ENST00000602164	CBFA2T2	O43439	604 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	ADAM23	O75077	832 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	KLF8	O95600	359 aa	Predicted RBP	27.79	■■■□□ 2.04
USF2-215	ENST00000602164	TACR2	P21452	398 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	RPS24	P62847	133 aa	Known RBP	27.79	■■■□□ 2.04
USF2-215	ENST00000602164	EGFLAM	Q63HQ2	1017 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	RAP1GAP2	Q684P5	730 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	NUDT18	Q6ZVK8	323 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	MCOLN2	Q8IZK6	566 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	TXNDC5	Q8NBS9	432 aa	Known RBP	27.79	■■■□□ 2.04
USF2-215	ENST00000602164	ARHGEF38	Q9NXL2	777 aa		27.79	■■■□□ 2.04
USF2-215	ENST00000602164	VPS13A	Q96RL7	3174 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	C2CD4B	A6NLJ0	364 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	SGK1	O00141	431 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	TBL1X	O60907	577 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	HNRNPL	P14866	589 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
USF2-215	ENST00000602164	ABCB4	P21439	1286 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	HLA-F	P30511	346 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	ATXN1	P54253	815 aa	Known RBP	27.78	■■■□□ 2.04
USF2-215	ENST00000602164	ANKS1B	Q7Z6G8	1248 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	27.78	■■■□□ 2.04
USF2-215	ENST00000602164	CHSY1	Q86X52	802 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
USF2-215	ENST00000602164	ZNF513	Q8N8E2	541 aa	Predicted RBP	27.78	■■■□□ 2.04
USF2-215	ENST00000602164	CPLX3	Q8WVH0	158 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	SLC8A2	Q9UPR5	921 aa		27.78	■■■□□ 2.04
USF2-215	ENST00000602164	AP5Z1	O43299	807 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	ENDOD1	O94919	500 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	ADCY5	O95622	1261 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	NRL	P54845	237 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	DEUP1	Q05D60	604 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	BRMS1L	Q5PSV4	323 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	PPP1R15B	Q5SWA1	713 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	TMEM215	Q68D42	235 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	VSTM4	Q8IW00	320 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	LGI2	Q8N0V4	545 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	RXFP2	Q8WXD0	754 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	RNF34	Q969K3	372 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	LMLN	Q96KR4	655 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	HHIP	Q96QV1	700 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	SLC12A6	Q9UHW9	1150 aa		27.77	■■■□□ 2.04
USF2-215	ENST00000602164	LUC7L2	Q9Y383	392 aa	Known RBP	27.77	■■■□□ 2.04
USF2-215	ENST00000602164	MYO18A	Q92614	2054 aa	Known RBP	27.76	■■■□□ 2.03
USF2-215	ENST00000602164	PAGE1	O75459	146 aa		27.76	■■■□□ 2.03
USF2-215	ENST00000602164	F9	P00740	461 aa		27.76	■■■□□ 2.03
USF2-215	ENST00000602164	KRT3	P12035	628 aa		27.76	■■■□□ 2.03
USF2-215	ENST00000602164	CASP14	P31944	242 aa		27.76	■■■□□ 2.03
USF2-215	ENST00000602164	RFC1	P35251	1148 aa	Predicted RBP	27.76	■■■□□ 2.03
USF2-215	ENST00000602164	PTPN9	P43378	593 aa		27.76	■■■□□ 2.03
USF2-215	ENST00000602164	FNTB	P49356	437 aa		27.76	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms