RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 CHPFQ8IZ52 775 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 DEFB106AQ8N104 65 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 MSANTD4Q8NCY6 345 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 NEK11Q8NG66 645 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 WFIKKN2Q8TEU8 576 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 TMA16Q96EY4 203 aaKnown RBP17.85■□□□□ 0.45
HERC3-214ENST00000601319 PRICKLE1Q96MT3 831 aaPredicted RBP17.85■□□□□ 0.45
HERC3-214ENST00000601319 PDCL3Q9H2J4 239 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 FAM204AQ9H8W3 233 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 CLEC4EQ9ULY5 219 aa17.85■□□□□ 0.45
HERC3-214ENST00000601319 SMTNL1A8MU46 457 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 TSPAN3O60637 253 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 GFPT2O94808 682 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 SLC2A3P11169 496 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 SGSHP51688 502 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 NOMO3P69849 1222 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 CDR2Q01850 454 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 MTA1Q13330 715 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 USP39Q53GS9 565 aaKnown RBP17.84■□□□□ 0.45
HERC3-214ENST00000601319 OR6B2Q6IFH4 312 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 KIAA0907Q7Z7F0 614 aaPredicted RBP17.84■□□□□ 0.45
HERC3-214ENST00000601319 UCMAQ8WVF2 138 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 BTN2A3PQ96KV6 586 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 SPAG5Q96R06 1193 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 ACOX2Q99424 681 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 NLRC4Q9NPP4 1024 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.45
HERC3-214ENST00000601319 RRN3Q9NYV6 651 aa17.84■□□□□ 0.45
HERC3-214ENST00000601319 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
HERC3-214ENST00000601319 CACNA1AO00555 2505 aa17.83■□□□□ 0.45
HERC3-214ENST00000601319 DOCK4Q8N1I0 1966 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TCRBV21S2A2A0A5A6 115 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TYW5A2RUC4 315 aaKnown RBP17.83■□□□□ 0.44
HERC3-214ENST00000601319 TIMM44O43615 452 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 EPN2O95208 641 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 MMEP08473 750 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TGM1P22735 817 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 HLA-FP30511 346 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 NOS2P35228 1153 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 STAT1P42224 750 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 MATKP42679 507 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 ZNF165P49910 485 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 PITX1P78337 314 aaPredicted RBP17.83■□□□□ 0.44
HERC3-214ENST00000601319 PLK5Q496M5 336 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 MS4A13Q5J8X5 152 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TAF3Q5VWG9 929 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 RFWD3Q6PCD5 774 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TRIM72Q6ZMU5 477 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 KBTBD6Q86V97 674 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 AHI1Q8N157 1196 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 C18orf8Q96DM3 657 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 TPSD1Q9BZJ3 242 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 DUSP15Q9H1R2 295 aaPredicted RBP17.83■□□□□ 0.44
HERC3-214ENST00000601319 TMEM51Q9NW97 253 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 DDIT4Q9NX09 232 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 ELOVL2Q9NXB9 296 aa17.83■□□□□ 0.44
HERC3-214ENST00000601319 GOLGA6L7A0A1B0GV03 622 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 KCNU1A8MYU2 1149 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 TBL1XO60907 577 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 GABRG2P18507 467 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 CCR1P32246 355 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 GBP1P32455 592 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 P2RY2P41231 377 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 ELF2Q15723 593 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 ZC3H12AQ5D1E8 599 aaKnown RBP17.82■□□□□ 0.44
HERC3-214ENST00000601319 ARCQ7LC44 396 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 ERICH1Q86X53 443 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 XYLT1Q86Y38 959 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 KIAA2013Q8IYS2 634 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 ABCA7Q8IZY2 2146 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 SLC20A1Q8WUM9 679 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 HMGB4Q8WW32 186 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 NT5C3BQ969T7 300 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 SPACA7Q96KW9 195 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 PCMTD1Q96MG8 357 aaPredicted RBP17.82■□□□□ 0.44
HERC3-214ENST00000601319 NUCKS1Q9H1E3 243 aaKnown RBP17.82■□□□□ 0.44
HERC3-214ENST00000601319 PARD6AQ9NPB6 346 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 CACNA2D2Q9NY47 1150 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 BCCIPQ9P287 314 aaKnown RBP eCLIP17.82■□□□□ 0.44
HERC3-214ENST00000601319 GGA2Q9UJY4 613 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 PCDHGA5Q9Y5G8 931 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 STON1Q9Y6Q2 735 aa17.82■□□□□ 0.44
HERC3-214ENST00000601319 FOXD2O60548 495 aaPredicted RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 GRAP2O75791 330 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 RHOBTB1O94844 696 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 MOCS2O96007 188 aaPredicted RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 CYP1A1P04798 512 aaPredicted RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 PABPC1P11940 636 aaKnown RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 CHRNB2P17787 502 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 WASP42768 502 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 FMO1Q01740 532 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 LMNB2Q03252 620 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 BYSLQ13895 437 aaKnown RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 IQCB1Q15051 598 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 TTC39BQ5VTQ0 682 aaPredicted RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 OTUD1Q5VV17 481 aaPredicted RBP17.81■□□□□ 0.44
HERC3-214ENST00000601319 NAA35Q5VZE5 725 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 PMS2CLQ68D20 193 aa17.81■□□□□ 0.44
HERC3-214ENST00000601319 TMEM215Q68D42 235 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms