RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 OLFML1Q6UWY5 402 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 NOP9Q86U38 636 aaKnown RBP23.46■■□□□ 1.35
CCDC9-204ENST00000599398 SLC2A13Q96QE2 648 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 SPAG5Q96R06 1193 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 GABRG3Q99928 467 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 ELOVL2Q9NXB9 296 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 COX16Q9P0S2 106 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 STON1Q9Y6Q2 735 aa23.46■■□□□ 1.35
CCDC9-204ENST00000599398 EPN2O95208 641 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 ZNF18P17022 549 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 GABRG2P18507 467 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 HLA-FP30511 346 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 SLC6A3Q01959 620 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 LMNB2Q03252 620 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 EIF4HQ15056 248 aaKnown RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 CCDC6Q16204 474 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 KIAA1211LQ6NV74 962 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 HJURPQ8NCD3 748 aaPredicted RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 NEK11Q8NG66 645 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 OLIG1Q8TAK6 271 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 SORCS1Q8WY21 1168 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 RNF34Q969K3 372 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 IRX2Q9BZI1 471 aaPredicted RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 NUCKS1Q9H1E3 243 aaKnown RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 ABCB8Q9NUT2 735 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 DDIT4Q9NX09 232 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 THAP10Q9P2Z0 257 aaPredicted RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 XPO7Q9UIA9 1087 aaKnown RBP23.45■■□□□ 1.34
CCDC9-204ENST00000599398 SIK3Q9Y2K2 1263 aa23.45■■□□□ 1.34
CCDC9-204ENST00000599398 NPC1O15118 1278 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 EPHB6O15197 1021 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 MAP3K13O43283 966 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 IGLV3-25P01717 112 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 MMEP08473 750 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 BCKDHBP21953 392 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 P2RY2P41231 377 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 BYSLQ13895 437 aaKnown RBP23.44■■□□□ 1.34
CCDC9-204ENST00000599398 STARD3Q14849 445 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 E2F5Q15329 346 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 CSRP2Q16527 193 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 MPP7Q5T2T1 576 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 ERICH1Q86X53 443 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 MFN1Q8IWA4 741 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 EPS8L1Q8TE68 723 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 WFIKKN2Q8TEU8 576 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 DDX1Q92499 740 aaKnown RBP23.44■■□□□ 1.34
CCDC9-204ENST00000599398 PRICKLE1Q96MT3 831 aaPredicted RBP23.44■■□□□ 1.34
CCDC9-204ENST00000599398 SLC12A6Q9UHW9 1150 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 GGA2Q9UJY4 613 aa23.44■■□□□ 1.34
CCDC9-204ENST00000599398 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.44■■□□□ 1.34
CCDC9-204ENST00000599398 TIMM44O43615 452 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 DAB1O75553 588 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 CDH5P33151 784 aaPredicted RBP23.43■■□□□ 1.34
CCDC9-204ENST00000599398 SOX5P35711 763 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 IL12RB1P42701 662 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 RNASE9P60153 205 aaKnown RBP23.43■■□□□ 1.34
CCDC9-204ENST00000599398 RPS24P62847 133 aaKnown RBP23.43■■□□□ 1.34
CCDC9-204ENST00000599398 ZNF234Q14588 700 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 MS4A13Q5J8X5 152 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 RAP1GAP2Q684P5 730 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 PMS2CLQ68D20 193 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 TMEM215Q68D42 235 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 CHST9Q7L1S5 443 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 SLC26A9Q7LBE3 791 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 CHSY1Q86X52 802 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 ZDHHC17Q8IUH5 632 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 CCDC117Q8IWD4 279 aaPredicted RBP23.43■■□□□ 1.34
CCDC9-204ENST00000599398 LGI2Q8N0V4 545 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 ATP6V0D2Q8N8Y2 350 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 MSANTD4Q8NCY6 345 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 WFDC5Q8TCV5 224 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 RMDN1Q96DB5 314 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 C18orf8Q96DM3 657 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 BTN2A3PQ96KV6 586 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 HSD3B7Q9H2F3 369 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.43■■□□□ 1.34
CCDC9-204ENST00000599398 CALCOCO1Q9P1Z2 691 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 DAAM1Q9Y4D1 1078 aa23.43■■□□□ 1.34
CCDC9-204ENST00000599398 LSM8O95777 96 aaKnown RBP23.42■■□□□ 1.34
CCDC9-204ENST00000599398 SLC2A3P11169 496 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 PABPC1P11940 636 aaKnown RBP23.42■■□□□ 1.34
CCDC9-204ENST00000599398 ATP1A3P13637 1013 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 NDUFV2P19404 249 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 ABCB4P21439 1286 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 STAT1P42224 750 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 CREB5Q02930 508 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 NME3Q13232 169 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 SERPINA13PQ6UXR4 307 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 PRR23CQ6ZRP0 262 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 AHI1Q8N157 1196 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 CFAP52Q8N1V2 620 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 CARNMT1Q8N4J0 409 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 FRMD1Q8N878 549 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 ZNF557Q8N988 423 aaPredicted RBP23.42■■□□□ 1.34
CCDC9-204ENST00000599398 SLC20A1Q8WUM9 679 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 MYEOVQ96EZ4 313 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 PCDHGA5Q9Y5G8 931 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 NUP205Q92621 2012 aa23.42■■□□□ 1.34
CCDC9-204ENST00000599398 GON4LQ3T8J9 2241 aa23.41■■□□□ 1.34
CCDC9-204ENST00000599398 PLXND1Q9Y4D7 1925 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms