RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 ELOVL2Q9NXB9 296 aa12.63□□□□□ -0.39
LIG1-217ENST00000599165 LAMA1P25391 3075 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 FAM170AA1A519 330 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 I6L893 689 aaPredicted RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 GRAP2O75791 330 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ALDH1A2O94788 518 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 CYBBP04839 570 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ZNF806P0C7X5 589 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 CD70P32970 193 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 MPLP40238 635 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 JAM2P57087 298 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 RPS24P62847 133 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 RAPGEF1Q13905 1077 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 PTPRNQ16849 979 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 FUT11Q495W5 492 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ZC3H12AQ5D1E8 599 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 ARTNQ5T4W7 220 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 DEFB106AQ8N104 65 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 EPS8L1Q8TE68 723 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 MRGPRX1Q96LB2 322 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 MKRN2Q9H000 416 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 ABCB8Q9NUT2 735 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ASNSD1Q9NWL6 643 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 LIMA1Q9UHB6 759 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 INTS6Q9UL03 887 aaKnown RBP12.62□□□□□ -0.39
LIG1-217ENST00000599165 PCDHGA5Q9Y5G8 931 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 CACNA1EQ15878 2313 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 ADAMTS9Q9P2N4 1935 aa12.62□□□□□ -0.39
LIG1-217ENST00000599165 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 ASCC3Q8N3C0 2202 aaKnown RBP12.61□□□□□ -0.39
LIG1-217ENST00000599165 IGHV1OR15-9A0A0B4J2B8 117 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 TBL1XO60907 577 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 C7P10643 843 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 CHRNB2P17787 502 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 TFE3P19532 575 aaPredicted RBP12.61□□□□□ -0.39
LIG1-217ENST00000599165 GBP1P32455 592 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 PTGER3P43115 390 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
LIG1-217ENST00000599165 COPAP53621 1224 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 ZNF445P59923 1031 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 MYL5Q02045 173 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 PUM1Q14671 1186 aaKnown RBP eCLIP12.61□□□□□ -0.391e-9■□□□□ 10.3
LIG1-217ENST00000599165 EIF4HQ15056 248 aaKnown RBP12.61□□□□□ -0.39
LIG1-217ENST00000599165 STX1AQ16623 288 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 FSCBQ5H9T9 825 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 MS4A13Q5J8X5 152 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 MPP7Q5T2T1 576 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 CCDC183Q5T5S1 534 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 NUDT18Q6ZVK8 323 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 SLC26A9Q7LBE3 791 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 SLC20A1Q8WUM9 679 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 MYO19Q96H55 970 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 STK33Q9BYT3 514 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
LIG1-217ENST00000599165 TMEM245Q9H330 911 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 ANLNQ9NQW6 1124 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 ANO10Q9NW15 660 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 BCCIPQ9P287 314 aaKnown RBP eCLIP12.61□□□□□ -0.39
LIG1-217ENST00000599165 DOCK4Q8N1I0 1966 aa12.61□□□□□ -0.39
LIG1-217ENST00000599165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
LIG1-217ENST00000599165 LRRC10BA6NIK2 292 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 HSF2BPO75031 334 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 DAB1O75553 588 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 RHOBTB1O94844 696 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 MBD3O95983 291 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 MOCS2O96007 188 aaPredicted RBP12.6□□□□□ -0.39
LIG1-217ENST00000599165 GLI1P08151 1106 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 MMEP08473 750 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 PABPC1P11940 636 aaKnown RBP12.6□□□□□ -0.39
LIG1-217ENST00000599165 ATP1A3P13637 1013 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 HLA-EP13747 358 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 GABRB2P47870 512 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 SLC11A2P49281 568 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 IRAK1P51617 712 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 NOMO3P69849 1222 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 ARHGAP8P85298 464 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 CREB5Q02930 508 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 TYRO3Q06418 890 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 LMAN2Q12907 356 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 ELF2Q15723 593 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 C2CD6Q53TS8 623 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 DCAF6Q58WW2 860 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
LIG1-217ENST00000599165 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms