RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	ENGASE	Q8NFI3	743 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	LMO3	Q8TAP4	145 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ADAMTS14	Q8WXS8	1223 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PRCC	Q92733	491 aa	Predicted RBP	11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PLD4	Q96BZ4	506 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SLC2A11	Q9BYW1	496 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	GAREM1	Q9H706	876 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PRSS16	Q9NQE7	514 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ABCB8	Q9NUT2	735 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	STRIP2	Q9ULQ0	834 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	NFE2L3	Q9Y4A8	694 aa		11.51	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MEI4	A8MW99	385 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	NPC1	O15118	1278 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CETN3	O15182	167 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BCAT2	O15382	392 aa	Predicted RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TIMM44	O43615	452 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SYNCRIP	O60506	623 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	IGLV3-27	P01718	113 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ATXN1L	P0C7T5	689 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	LCP1	P13796	627 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CD44	P16070	742 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ZNF132	P52740	706 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	DAOA	P59103	153 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	RPS14	P62263	151 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SCAP	Q12770	1279 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	EIF4H	Q15056	248 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ZNF423	Q2M1K9	1284 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MPPE1	Q53F39	396 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	FAM133B	Q5BKY9	247 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ADGRF1	Q5T601	910 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	LRSAM1	Q6UWE0	723 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SERPINA13P	Q6UXR4	307 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CHST9	Q7L1S5	443 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CCDC150	Q8NCX0	1101 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	OR2T3	Q8NH03	318 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SPATA20	Q8TB22	786 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SLC35F5	Q8WV83	523 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	UCMA	Q8WVF2	138 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	KCTD13	Q8WZ19	329 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TMA16	Q96EY4	203 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MYO19	Q96H55	970 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	NUP58	Q9BVL2	599 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SUSD2	Q9UGT4	822 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	INTS6	Q9UL03	887 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	HBS1L	Q9Y450	684 aa	Known RBP	11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PLXNB3	Q9ULL4	1909 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CKAP5	Q14008	2032 aa		11.5	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	C10orf142	B7Z368	130 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	DKK1	O94907	266 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CYBB	P04839	570 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	EPB41	P11171	864 aa	Known RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	VDR	P11473	427 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CD19	P15391	556 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	GNS	P15586	552 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TRIM21	P19474	475 aa	Known RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BMP6	P22004	513 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	OXTR	P30559	389 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BCAT1	P54687	386 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BST2	Q10589	180 aa	Known RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	COL9A2	Q14055	689 aa	Predicted RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SGO2	Q562F6	1265 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PIK3R6	Q5UE93	754 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MBLAC2	Q68D91	279 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MSANTD2	Q6P1R3	559 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	LCLAT1	Q6UWP7	414 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	GLRX5	Q86SX6	157 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PROSER1	Q86XN7	944 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SCML4	Q8N228	414 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TTC39C	Q8N584	583 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CCDC47	Q96A33	483 aa	Known RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	EBF2	Q9HAK2	575 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	LRRC4	Q9HBW1	653 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TM7SF3	Q9NS93	570 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SERGEF	Q9UGK8	458 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	GGA2	Q9UJY4	613 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SNX11	Q9Y5W9	270 aa		11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	GOLGA4	Q13439	2230 aa	Known RBP	11.49	□□□□□ -0.57
GRAMD1A-209	ENST00000598580		H0Y626	953 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	WNT9A	O14904	365 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	SLC16A3	O15427	465 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TRIM16	O95361	564 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	IGHV4-34	P06331	123 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	PABPC1	P11940	636 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	BRD2	P25440	801 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	CTSO	P43234	321 aa	Predicted RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	HARS2	P49590	506 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	HNRNPD	Q14103	355 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	FNDC3B	Q53EP0	1204 aa	Known RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	COBLL1	Q53SF7	1204 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	FSCB	Q5H9T9	825 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TCERG1L	Q5VWI1	586 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	ISM2	Q6H9L7	571 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	C19orf48	Q6RUI8	117 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	TMEM270	Q6UE05	265 aa		11.48	□□□□□ -0.57
GRAMD1A-209	ENST00000598580	MMS22L	Q6ZRQ5	1243 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms