RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ATXN2LQ8WWM7 1075 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 HTR3CQ8WXA8 447 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 GPR62Q9BZJ7 368 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 KLC2Q9H0B6 622 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TKTL2Q9H0I9 626 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 WDCPQ9H6R7 721 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TTC3P53804 2025 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 F9P00740 461 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 APRTP07741 180 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 ERCC2P18074 760 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 CCT5P48643 541 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 GPR15P49685 360 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TMED2Q15363 201 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 CAND1Q86VP6 1230 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 NLRP14Q86W24 1093 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 SEPT8Q92599 483 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 BADQ92934 168 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 MRRFQ96E11 262 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 PRDM16Q9HAZ2 1276 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 HACD1B0YJ81 288 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 NDUFAB1O14561 156 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 IGLV3-25P01717 112 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 CSF2RAP15509 400 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 ATP5DP30049 168 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 TPI1P60174 286 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 YWHAGP61981 247 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 PRKD1Q15139 912 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 SCD5Q86SK9 330 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 CEP57Q86XR8 500 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 TDRPQ86YL5 185 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 CRIPAKQ8N1N5 446 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 FBF1Q8TES7 1133 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 CENPTQ96BT3 561 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 CCT8L2Q96SF2 557 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 PRDM12Q9H4Q4 367 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 MARCH5Q9NX47 278 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 ADAM28Q9UKQ2 775 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.46e-8■■■■■ 58.8
SHKBP1-216ENST00000598201 VWA8A3KMH1 1905 aa17.58■□□□□ 0.4
SHKBP1-216ENST00000598201 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SRRM3A6NNA2 597 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 F5H423 210 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SLC11A1P49279 550 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 AP1B1Q10567 949 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 MPP2Q14168 576 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 DDR2Q16832 855 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 ARL13BQ3SXY8 428 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 ANKRD20A2Q5SQ80 823 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 ANKRD20A1Q5TYW2 823 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 FAM171A1Q5VUB5 890 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 ANKRD20A3Q5VUR7 823 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 BZW1Q7L1Q6 419 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 PALM2Q8IXS6 379 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SRRM1Q8IYB3 904 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 DCP1BQ8IZD4 617 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 VPS52Q8N1B4 723 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 RIBC1Q8N443 379 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 TTC9BQ8N6N2 239 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 P2RY11Q96G91 374 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 PGLYRP2Q96PD5 576 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 NMUR1Q9HB89 426 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 A0A0A0MRY4 1105 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 TMEM120BA0PK00 339 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 GMNCA6NCL1 334 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SYN3O14994 580 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 RFC2P35250 354 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 PBX3P40426 434 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 HCAR3P49019 387 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 PPP1R21Q6ZMI0 780 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 DENND5BQ6ZUT9 1274 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 ZNF534Q76KX8 674 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 DEFB128Q7Z7B8 93 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 NPWQ8N729 165 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SPATA13Q96N96 652 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 CEP41Q9BYV8 373 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 FAM107BQ9H098 131 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 INTS9Q9NV88 658 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 OR12D3Q9UGF7 316 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 RSPH14Q9UHP6 348 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 NUDT5Q9UKK9 219 aa17.57■□□□□ 0.4
SHKBP1-216ENST00000598201 SCN5AQ14524 2016 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 PHBP35232 272 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 CBLBQ13191 982 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 MRPL58Q14197 206 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 PDK1Q15118 436 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 CTXN3Q4LDR2 81 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 C4orf22Q6V702 233 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 ARHGEF18Q6ZSZ5 1173 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 CCNYQ8ND76 341 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 RNF34Q969K3 372 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 LBHD1Q9BQE6 289 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 ACSS3Q9H6R3 686 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
SHKBP1-216ENST00000598201 OSER1Q9NX31 292 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms