RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 SLC6A3Q01959 620 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ENPP2Q13822 863 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 SYCP1Q15431 976 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 USP39Q53GS9 565 aaKnown RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 DCAF6Q58WW2 860 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ZC3H12AQ5D1E8 599 aaKnown RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 MPP7Q5T2T1 576 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 TAF3Q5VWG9 929 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 KIAA1211LQ6NV74 962 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 SLC26A9Q7LBE3 791 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 KIAA0907Q7Z7F0 614 aaPredicted RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 TMEM35BQ8NCS4 154 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 WFDC5Q8TCV5 224 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 PRICKLE1Q96MT3 831 aaPredicted RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 BPIFA3Q9BQP9 254 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 NLRC4Q9NPP4 1024 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 ELOVL2Q9NXB9 296 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 NOCTQ9UK39 431 aaKnown RBP16.5■□□□□ 0.23
KHSRP-209ENST00000597704 DAAM1Q9Y4D1 1078 aa16.5■□□□□ 0.23
KHSRP-209ENST00000597704 CABIN1Q9Y6J0 2220 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 WASH3PC4AMC7 463 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 TBL1XO60907 577 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 DAB1O75553 588 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 GFPT2O94808 682 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 MOCS2O96007 188 aaPredicted RBP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 MMEP08473 750 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 ATP1A3P13637 1013 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 CDK11BP21127 795 aaKnown RBP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 P2RY2P41231 377 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 GABRB2P47870 512 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 SNX16P57768 344 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 CDK17Q00537 523 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 EIF4HQ15056 248 aaKnown RBP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 SDE2Q6IQ49 451 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 UCMAQ8WVF2 138 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 FUCA2Q9BTY2 467 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 PDCL3Q9H2J4 239 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 BCCIPQ9P287 314 aaKnown RBP eCLIP16.49■□□□□ 0.23
KHSRP-209ENST00000597704 USP18Q9UMW8 372 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 STON1Q9Y6Q2 735 aa16.49■□□□□ 0.23
KHSRP-209ENST00000597704 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 NPC1O15118 1278 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 LSM8O95777 96 aaKnown RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 APOEP02649 317 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 CHRNB2P17787 502 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 SOX5P35711 763 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 IL12RB1P42701 662 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 RPS24P62847 133 aaKnown RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 NOMO3P69849 1222 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 UBXN1Q04323 297 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 ZNF234Q14588 700 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 MS4A13Q5J8X5 152 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 OTUD1Q5VV17 481 aaPredicted RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 PMS2CLQ68D20 193 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 ZDHHC17Q8IUH5 632 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 WFIKKN2Q8TEU8 576 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 SLC20A1Q8WUM9 679 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 RLN3Q8WXF3 142 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 SORCS1Q8WY21 1168 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 C18orf8Q96DM3 657 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 LMLNQ96KR4 655 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 DDX50Q9BQ39 737 aaKnown RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 ARRDC1-AS1Q9H2J1 176 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 SYNCQ9H7C4 482 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 FAM204AQ9H8W3 233 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 SEMA4GQ9NTN9 838 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 ABCB8Q9NUT2 735 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 MBD1Q9UIS9 605 aaPredicted RBP16.48■□□□□ 0.23
KHSRP-209ENST00000597704 RAD54BQ9Y620 910 aa16.48■□□□□ 0.23
KHSRP-209ENST00000597704 DOCK9Q9BZ29 2069 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 NCOR2Q9Y618 2525 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 KCNU1A8MYU2 1149 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 TIMM44O43615 452 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 RHOBTB1O94844 696 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 PABPC1P11940 636 aaKnown RBP16.47■□□□□ 0.23
KHSRP-209ENST00000597704 NDUFV2P19404 249 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 GBP1P32455 592 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 CD70P32970 193 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 SCNN1AP37088 669 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 FMO1Q01740 532 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 ELF2Q15723 593 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 CSRP2Q16527 193 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 CHST9Q7L1S5 443 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 ADIPOR2Q86V24 386 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 C11orf74Q86VG3 221 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 ZNF677Q86XU0 584 aa16.47■□□□□ 0.23
KHSRP-209ENST00000597704 XYLT1Q86Y38 959 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms