RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 SLC47A2Q86VL8 602 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 SLC41A1Q8IVJ1 513 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 C1orf131Q8NDD1 294 aaKnown RBP13.57□□□□□ -0.24
LIG1-212ENST00000596549 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 MKRN2Q9H000 416 aaKnown RBP13.57□□□□□ -0.24
LIG1-212ENST00000596549 NUCKS1Q9H1E3 243 aaKnown RBP13.57□□□□□ -0.24
LIG1-212ENST00000596549 ABCB8Q9NUT2 735 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 DACH1Q9UI36 760 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 TLR6Q9Y2C9 796 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 FHOD1Q9Y613 1164 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 TMEM131Q92545 1883 aa13.57□□□□□ -0.24
LIG1-212ENST00000596549 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 TBL1XO60907 577 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PABPC1P11940 636 aaKnown RBP13.56□□□□□ -0.24
LIG1-212ENST00000596549 HLA-EP13747 358 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 ITPKAP23677 461 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 CD70P32970 193 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 CLCN1P35523 988 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
LIG1-212ENST00000596549 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PTPRNQ16849 979 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PTPN20Q4JDL3 420 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PPM1JQ5JR12 505 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 LYSMD4Q5XG99 296 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 KIAA1324Q6UXG2 1013 aaKnown RBP13.56□□□□□ -0.24
LIG1-212ENST00000596549 CHST9Q7L1S5 443 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 CACUL1Q86Y37 369 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 UNC45BQ8IWX7 931 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 AHI1Q8N157 1196 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 DEFB119Q8N690 84 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 CYB5D2Q8WUJ1 264 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 UCMAQ8WVF2 138 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PIGKQ92643 395 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 AZIN2Q96A70 460 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 TMA16Q96EY4 203 aaKnown RBP13.56□□□□□ -0.24
LIG1-212ENST00000596549 LMLNQ96KR4 655 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 POPDC2Q9HBU9 364 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 PLCB1Q9NQ66 1216 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 USP36Q9P275 1121 aaKnown RBP13.56□□□□□ -0.24
LIG1-212ENST00000596549 GGA2Q9UJY4 613 aa13.56□□□□□ -0.24
LIG1-212ENST00000596549 DOCK4Q8N1I0 1966 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 FOXN3O00409 490 aaPredicted RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 NPC1O15118 1278 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 AP5Z1O43299 807 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 MOCS2O96007 188 aaPredicted RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 ERBB2P04626 1255 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 SLC11A2P49281 568 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 RPS24P62847 133 aaKnown RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 BYSLQ13895 437 aaKnown RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 STARD3Q14849 445 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 TCP11X2Q5H9J9 407 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 SPDYCQ5MJ68 293 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 MPP7Q5T2T1 576 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 OTUD1Q5VV17 481 aaPredicted RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 OLFML1Q6UWY5 402 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 FAM183BPQ6ZVS7 135 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 FAM71AQ8IYT1 594 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 ZNF366Q8N895 744 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 WFIKKN2Q8TEU8 576 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 MYO19Q96H55 970 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 SLC2A13Q96QE2 648 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 TMEM245Q9H330 911 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 EVLQ9UI08 416 aaPredicted RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 PILRBQ9UKJ0 227 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 INTS6Q9UL03 887 aaKnown RBP13.55□□□□□ -0.24
LIG1-212ENST00000596549 NFE2L3Q9Y4A8 694 aa13.55□□□□□ -0.24
LIG1-212ENST00000596549 CDX4O14627 284 aaPredicted RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 CAPN9O14815 690 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 MAP3K13O43283 966 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 ZNF217O75362 1048 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 TRUB2O95900 331 aaKnown RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 ADRB1P08588 477 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 YWHAZP63104 245 aaKnown RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 IRX4P78413 519 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 PTK2Q05397 1052 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 LMAN2Q12907 356 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 TRIM61Q5EBN2 209 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 MBLAC2Q68D91 279 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 IL31Q6EBC2 164 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 SMYD5Q6GMV2 418 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 SERPINA13PQ6UXR4 307 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 C11orf57Q6ZUT1 292 aaPredicted RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 SYT12Q8IV01 421 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 DEFB106AQ8N104 65 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 HJURPQ8NCD3 748 aaPredicted RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
LIG1-212ENST00000596549 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
LIG1-212ENST00000596549 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms