RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SEMA5AQ13591 1074 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 SOWAHAQ2M3V2 549 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 C6orf163Q5TEZ5 329 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 LINC01465Q8N7H1 131 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 THAP1Q9NVV9 213 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 NDE1Q9NXR1 346 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 DNAJC16Q9Y2G8 782 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 A0A0G2JLL6 359 aaPredicted RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 USP1O94782 785 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 GSRP00390 522 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 KCNA4P22459 653 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 SESN2P58004 480 aaPredicted RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 WASHC5Q12768 1159 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 CDC16Q13042 620 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 DNAL1Q4LDG9 190 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 NCBP2-AS2Q69YL0 99 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 TIFABQ6ZNK6 161 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 PRRT2Q7Z6L0 340 aaPredicted RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 RAB3IL1Q8TBN0 382 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 ZNF778Q96MU6 729 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
LIG1-206ENST00000594067 LGMNQ99538 433 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 CEP41Q9BYV8 373 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 EMCNQ9ULC0 261 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 MCM3APO60318 1980 aa16.99■□□□□ 0.31
LIG1-206ENST00000594067 TPP1O14773 563 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 BUD23O43709 281 aaKnown RBP16.98■□□□□ 0.31
LIG1-206ENST00000594067 BAG2O95816 211 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 SETSIPP0DME0 302 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 CCDC130P13994 396 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 ZFXP17010 805 aaPredicted RBP16.98■□□□□ 0.31
LIG1-206ENST00000594067 GOT1P17174 413 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 GSTT1P30711 240 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 ARHGAP1Q07960 439 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 TMCO4Q5TGY1 634 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 SHKBP1Q8TBC3 707 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 HTR3CQ8WXA8 447 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 C1orf21Q9H246 121 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 GPAMQ9HCL2 828 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 TUBGCP4Q9UGJ1 667 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 PTPRFP10586 1907 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 SDR42E2A6NKP2 422 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 ALDOAP04075 364 aaKnown RBP16.98■□□□□ 0.31
LIG1-206ENST00000594067 SERPINA6P08185 405 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 PTPN9P43378 593 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 CDK18Q07002 472 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 KYAT1Q16773 422 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 GLRA4Q5JXX5 417 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 MBLAC2Q68D91 279 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 ARCQ7LC44 396 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 SLC25A41Q8N5S1 370 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 GORASP1Q9BQQ3 440 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 XPNPEP3Q9NQH7 507 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
LIG1-206ENST00000594067 LTBP3Q9NS15 1303 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 A0A1B0GVG6 124 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 MGAT1P26572 445 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 CPOXP36551 454 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 NR2C2P49116 596 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 PACS1Q6VY07 963 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 KYAT3Q6YP21 454 aaKnown RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 TFB1MQ8WVM0 346 aaKnown RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 C18orf25Q96B23 403 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 GCOM2Q9BZD3 368 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 ZCWPW1Q9H0M4 648 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 GINS2Q9Y248 185 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 PSAT1Q9Y617 370 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 A0A088AWK7 358 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 ZNF487B1APH4 448 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 FGF3P11487 239 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 GMPRP36959 345 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 BAG6P46379 1132 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 PDE1CQ14123 709 aaPredicted RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 TEDDM1Q5T9Z0 273 aa16.97■□□□□ 0.31
LIG1-206ENST00000594067 MARK2Q7KZI7 788 aaKnown RBP16.97■□□□□ 0.31
LIG1-206ENST00000594067 E2F8A0AVK6 867 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 SLC1A6P48664 564 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 NIPAL4Q0D2K0 466 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 CNPY1Q3B7I2 92 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 RASIP1Q5U651 963 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 STEAP4Q687X5 459 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 FAM131BQ86XD5 332 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 WDR75Q8IWA0 830 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 POU5F2Q8N7G0 328 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 PIWIL2Q8TC59 973 aaKnown RBP16.96■□□□□ 0.31
LIG1-206ENST00000594067 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
LIG1-206ENST00000594067 CENPIQ92674 756 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms