RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FAM204AQ9H8W3 233 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 RRN3Q9NYV6 651 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 VPS18Q9P253 973 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 NDRG2Q9UN36 371 aaKnown RBP20.37■□□□□ 0.85
LSM4-203ENST00000593829 MTF2Q9Y483 593 aaPredicted RBP20.37■□□□□ 0.85
LSM4-203ENST00000593829 IGLV3-25P01717 112 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 ADH5P11766 374 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 GZMAP12544 262 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 TARSP26639 723 aaKnown RBP20.37■□□□□ 0.85
LSM4-203ENST00000593829 HNRNPH3P31942 346 aaKnown RBP20.37■□□□□ 0.85
LSM4-203ENST00000593829 GBP1P32455 592 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 GSCP56915 257 aaPredicted RBP20.37■□□□□ 0.85
LSM4-203ENST00000593829 VSNL1P62760 191 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 GAD2Q05329 585 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 ARCQ7LC44 396 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 TMEM25Q86YD3 366 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 TMEM59LQ9UK28 342 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 STAP1Q9ULZ2 295 aa20.37■□□□□ 0.85
LSM4-203ENST00000593829 DDX3XO00571 662 aaKnown RBP eCLIP20.36■□□□□ 0.851e-52■■■■■ 70.2
LSM4-203ENST00000593829 NCAM2O15394 837 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 IRAK2O43187 625 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 PI15O43692 258 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 LATS1O95835 1130 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 PITX1P78337 314 aaPredicted RBP20.36■□□□□ 0.85
LSM4-203ENST00000593829 PON2Q15165 354 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 TSR1Q2NL82 804 aaKnown RBP20.36■□□□□ 0.85
LSM4-203ENST00000593829 ANO4Q32M45 955 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 PHLDB2Q86SQ0 1253 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 ACRBPQ8NEB7 543 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 SLC39A13Q96H72 371 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 FCRL2Q96LA5 508 aaPredicted RBP20.36■□□□□ 0.85
LSM4-203ENST00000593829 DNAJC7Q99615 494 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 METTL5Q9NRN9 209 aaKnown RBP20.36■□□□□ 0.85
LSM4-203ENST00000593829 TAS2R14Q9NYV8 317 aa20.36■□□□□ 0.85
LSM4-203ENST00000593829 TMCO5BA8MYB1 307 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 MYO1CO00159 1063 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 TRDMT1O14717 391 aaKnown RBP20.35■□□□□ 0.85
LSM4-203ENST00000593829 AVPR2P30518 371 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 SLC11A2P49281 568 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 GAB4Q2WGN9 574 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 TPGS1Q6ZTW0 290 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 CCDC105Q8IYK2 499 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 MCOLN2Q8IZK6 566 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 CPXM2Q8N436 756 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 AZIN2Q96A70 460 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 VCPIP1Q96JH7 1222 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 P2RY13Q9BPV8 354 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.35■□□□□ 0.85
LSM4-203ENST00000593829 DDIT4Q9NX09 232 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 HOXC11O43248 304 aaPredicted RBP20.35■□□□□ 0.85
LSM4-203ENST00000593829 GYS2P54840 703 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 VCPP55072 806 aaKnown RBP20.35■□□□□ 0.85
LSM4-203ENST00000593829 EIF4EBP2Q13542 120 aaPredicted RBP20.35■□□□□ 0.85
LSM4-203ENST00000593829 HSP90B2PQ58FF3 399 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 FAM217AQ8IXS0 508 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 ZNF687Q8N1G0 1237 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 TMEM105Q8N8V8 129 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 C3orf20Q8ND61 904 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 CD101Q93033 1021 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 NPY6RQ99463 290 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 ZNHIT6Q9NWK9 470 aaKnown RBP20.35■□□□□ 0.85
LSM4-203ENST00000593829 MARK1Q9P0L2 795 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 ADAMTS1Q9UHI8 967 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 STOML2Q9UJZ1 356 aa20.35■□□□□ 0.85
LSM4-203ENST00000593829 SYNJ2BP-COX16A0A087WUM0 186 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 TARSL2A2RTX5 802 aaKnown RBP20.34■□□□□ 0.85
LSM4-203ENST00000593829 M0QYT0 321 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 APOEP02649 317 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 DCNP07585 359 aaKnown RBP20.34■□□□□ 0.85
LSM4-203ENST00000593829 PLEKP08567 350 aaPredicted RBP20.34■□□□□ 0.85
LSM4-203ENST00000593829 SLC2A3P11169 496 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 KRT3P12035 628 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 FLT3P36888 993 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 GALK1P51570 392 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 GRSF1Q12849 480 aaKnown RBP eCLIP20.34■□□□□ 0.85
LSM4-203ENST00000593829 SLC25A52Q3SY17 297 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 ZC3H12AQ5D1E8 599 aaKnown RBP20.34■□□□□ 0.85
LSM4-203ENST00000593829 TMEM196Q5HYL7 178 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 ADGRF1Q5T601 910 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 NT5C3BQ969T7 300 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 BBS2Q9BXC9 721 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.34■□□□□ 0.85
LSM4-203ENST00000593829 COX16Q9P0S2 106 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 ARHGAP20Q9P2F6 1191 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 F5P12259 2224 aa20.34■□□□□ 0.85
LSM4-203ENST00000593829 RTN2O75298 545 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 FTLP02792 175 aaPredicted RBP20.33■□□□□ 0.85
LSM4-203ENST00000593829 OPRD1P41143 372 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 SULT1E1P49888 294 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 NME3Q13232 169 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 RNF34Q969K3 372 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 SELENOOQ9BVL4 669 aa20.33■□□□□ 0.85
LSM4-203ENST00000593829 RRP15Q9Y3B9 282 aaKnown RBP20.33■□□□□ 0.85
LSM4-203ENST00000593829 EPN1Q9Y6I3 576 aaPredicted RBP20.33■□□□□ 0.85
LSM4-203ENST00000593829 NEDD8-MDP1E9PL57 170 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 ACSL4O60488 711 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 CCR1P32246 355 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 EIF2DP41214 584 aaKnown RBP20.33■□□□□ 0.84
LSM4-203ENST00000593829 FZD5Q13467 585 aa20.33■□□□□ 0.84
LSM4-203ENST00000593829 LRRC32Q14392 662 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms