RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 GABRR2P28476 465 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 EIF4EBP2Q13542 120 aaPredicted RBP17.25■□□□□ 0.35
GCDH-213ENST00000590627 HECTD3Q5T447 861 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 OTUD1Q5VV17 481 aaPredicted RBP17.25■□□□□ 0.35
GCDH-213ENST00000590627 TSSK4Q6SA08 328 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 DAAM2Q86T65 1068 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 DQX1Q8TE96 717 aaKnown RBP17.25■□□□□ 0.35
GCDH-213ENST00000590627 RNF139Q8WU17 664 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 SLITRK6Q9H5Y7 841 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 ALG6Q9Y672 507 aa17.25■□□□□ 0.35
GCDH-213ENST00000590627 HEPACAM2A8MVW5 462 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 ESPNB1AK53 854 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 OLFM2O95897 454 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 F9P00740 461 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
GCDH-213ENST00000590627 TDGF1P13385 188 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 COMTP21964 271 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 PCK1P35558 622 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 CCR3P51677 355 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 FCHO2Q0JRZ9 810 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 C15orf59Q2T9L4 293 aaPredicted RBP17.24■□□□□ 0.35
GCDH-213ENST00000590627 RSRC2Q7L4I2 434 aaKnown RBP17.24■□□□□ 0.35
GCDH-213ENST00000590627 ARFGAP1Q8N6T3 406 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 MRPS31Q92665 395 aaKnown RBP17.24■□□□□ 0.35
GCDH-213ENST00000590627 GCNAQ96QF7 691 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 TBCBQ99426 244 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 ADAM33Q9BZ11 813 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 LMAN1LQ9HAT1 526 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 ZMYM5Q9UJ78 669 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
GCDH-213ENST00000590627 A0A1W2PRU2 124 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 M0QYT0 321 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 CHADO15335 359 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 RNF8O76064 485 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 TUBB4AP04350 444 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 TFE3P19532 575 aaPredicted RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 DDX6P26196 483 aaKnown RBP eCLIP17.23■□□□□ 0.35
GCDH-213ENST00000590627 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 SULT1E1P49888 294 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 HDAC4P56524 1084 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 ATP11AP98196 1134 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 NNTQ13423 1086 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 RSPO4Q2I0M5 234 aaPredicted RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 TAC4Q86UU9 113 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 NT5DC3Q86UY8 548 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 YAF2Q8IY57 180 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 FAM172AQ8WUF8 416 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 ATXN3LQ9H3M9 355 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 C8orf33Q9H7E9 229 aaPredicted RBP17.23■□□□□ 0.35
GCDH-213ENST00000590627 CCSER2Q9H7U1 834 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 DNMT3LQ9UJW3 386 aa17.23■□□□□ 0.35
GCDH-213ENST00000590627 NCOR2Q9Y618 2525 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 MED19A0JLT2 244 aaPredicted RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 TMEM110-MUSTN1A8MSY1 372 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 COCHO43405 550 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 LRCH4O75427 683 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 TBX18O95935 607 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 CHRNB1P11230 501 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 GBP1P32455 592 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 ATP5C1P36542 298 aaKnown RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 KPNA1P52294 538 aaPredicted RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 GNG11P61952 73 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 ETF1P62495 437 aaKnown RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 SH3PXD2AQ5TCZ1 1133 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 LRRC38Q5VT99 294 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 CD101Q93033 1021 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 SERPINB11Q96P15 392 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 GOLPH3Q9H4A6 298 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 OBP2AQ9NY56 170 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 MARCH2Q9P0N8 246 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 CALCOCO1Q9P1Z2 691 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 JRKLQ9Y4A0 524 aa17.22■□□□□ 0.35
GCDH-213ENST00000590627 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
GCDH-213ENST00000590627 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 KIF2AO00139 706 aaPredicted RBP17.21■□□□□ 0.35
GCDH-213ENST00000590627 IRAK2O43187 625 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 WEE1P30291 646 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 MIPP30301 263 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 CXCR3P49682 368 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 LMNB2Q03252 620 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 EFEMP1Q12805 493 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 LRRC32Q14392 662 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 MEI1Q5TIA1 1274 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 TXNDC8Q6A555 127 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 CPNE8Q86YQ8 564 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
GCDH-213ENST00000590627 SLC35F6Q8N357 371 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 CELF5Q8N6W0 485 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms