RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ANKRD20A1Q5TYW2 823 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ANKRD20A3Q5VUR7 823 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ZNF280DQ6N043 979 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ZNF449Q6P9G9 518 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 BHLHA9Q7RTU4 235 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 YTHDF3Q7Z739 585 aaKnown RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 TRABD2AQ86V40 505 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 LRRTM3Q86VH5 581 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ZNF280BQ86YH2 543 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 NUP93Q8N1F7 819 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ZNF473Q8WTR7 871 aaKnown RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 DYDC1Q8WWB3 177 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 LINC01599Q8WXQ3 324 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 NDRG1Q92597 394 aaKnown RBP10.72□□□□□ -0.69
VPS25-203ENST00000589520 RNF34Q969K3 372 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 TOX2Q96NM4 488 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 SMC6Q96SB8 1091 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 DHRS4Q9BTZ2 278 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 C10orf88Q9H8K7 445 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 KCNK9Q9NPC2 374 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 RSPH14Q9UHP6 348 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ZNF180Q9UJW8 692 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 SCML2Q9UQR0 700 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
VPS25-203ENST00000589520 TCRBV7S3A2A0A539 114 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TMEM120BA0PK00 339 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 FAM47DPA6NHR8 397 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 GOLGA8MH3BSY2 632 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 I3L4J1 428 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 FGF10O15520 208 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 ERCC2P18074 760 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 KRT15P19012 456 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 ELK3P41970 407 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 SLC5A3P53794 718 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 CACNA2D1P54289 1103 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 GPX6P59796 221 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 IL9RQ01113 521 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 PPIDQ08752 370 aaKnown RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 PAN2Q504Q3 1202 aaKnown RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 GKAP1Q5VSY0 366 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 ARMC3Q5W041 872 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TTC19Q6DKK2 380 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 ITPRIPL1Q6GPH6 555 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 LRRC8BQ6P9F7 803 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 GPRIN1Q7Z2K8 1008 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 CPLX4Q7Z7G2 160 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 NPAS4Q8IUM7 802 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 PYROXD2Q8N2H3 581 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 COLGALT1Q8NBJ5 622 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 DBF4BQ8NFT6 615 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 SPPL2BQ8TCT7 592 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 FBF1Q8TES7 1133 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 ATXN2LQ8WWM7 1075 aaKnown RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 GRAMD1AQ96CP6 724 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 C1orf74Q96LT6 269 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 SERPINB11Q96P15 392 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TKTL2Q9H0I9 626 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 CATSPERBQ9H7T0 1116 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 PAK6Q9NQU5 681 aaPredicted RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 OLA1Q9NTK5 396 aaKnown RBP10.71□□□□□ -0.69
VPS25-203ENST00000589520 TMLHEQ9NVH6 421 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 IL37Q9NZH6 218 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 OGDHLQ9ULD0 1010 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
VPS25-203ENST00000589520 TRIOBPQ9H2D6 2365 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 SYNJ2BP-COX16A0A087WUM0 186 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 FAM92AA1XBS5 289 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MAGEB16A2A368 324 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 POC1B-GALNT4F8VUJ3 575 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 IRAK2O43187 625 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 NBNO60934 754 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 ZWINTO95229 277 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CXCL10P02778 98 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 APRTP07741 180 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 IBSPP21815 317 aaPredicted RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 FGFR3P22607 806 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MAGEA3P43357 314 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CCT5P48643 541 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 KPNA1P52294 538 aaPredicted RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 AP1B1Q10567 949 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 GPR17Q13304 367 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 NAB1Q13506 487 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 FASTKD3Q14CZ7 662 aaKnown RBP10.7□□□□□ -0.7
VPS25-203ENST00000589520 TMED2Q15363 201 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 CTXN3Q4LDR2 81 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 SLC39A12Q504Y0 691 aa10.7□□□□□ -0.7
VPS25-203ENST00000589520 VARS2Q5ST30 1063 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms