RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 BRMS1LQ5PSV4 323 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 PIK3R6Q5UE93 754 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
CNN1-208ENST00000588935 BNIPLQ7Z465 357 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 C14orf80Q86SX3 495 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 RHOT2Q8IXI1 618 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 OTUB2Q96DC9 234 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
CNN1-208ENST00000588935 MYEOVQ96EZ4 313 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 BBS2Q9BXC9 721 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 ZWILCHQ9H900 591 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 SLC2A4RGQ9NR83 387 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 ARHGEF38Q9NXL2 777 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 SALL4Q9UJQ4 1053 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 PAXBP1Q9Y5B6 917 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 HS3ST4Q9Y661 456 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 PIAS3Q9Y6X2 628 aa15.12■□□□□ 0.01
CNN1-208ENST00000588935 XIRP2A4UGR9 3374 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 F5P12259 2224 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 ARNTLO00327 626 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 DCXO43602 365 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 TBL1XO60907 577 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 SRGAP2O75044 1071 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 ADH1CP00326 375 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 CYBBP04839 570 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 ADH5P11766 374 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 TCF4P15884 667 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 GJA4P35212 333 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 SGSHP51688 502 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 GAD2Q05329 585 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 KIF5AQ12840 1032 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 AUHQ13825 339 aaKnown RBP15.11■□□□□ 0.01
CNN1-208ENST00000588935 TPRG1Q6ZUI0 275 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 UBALD2Q8IYN6 164 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 PYROXD2Q8N2H3 581 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 FNIP1Q8TF40 1166 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 AZIN2Q96A70 460 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 P2RY11Q96G91 374 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 PEBP4Q96S96 227 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 PPP1R9BQ96SB3 815 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
CNN1-208ENST00000588935 COL25A1Q9BXS0 654 aaPredicted RBP15.11■□□□□ 0.01
CNN1-208ENST00000588935 GOLPH3Q9H4A6 298 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 COL4A3Q01955 1670 aa15.11■□□□□ 0.01
CNN1-208ENST00000588935 MACROD2A1Z1Q3 448 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 F5H5T6 163 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 LRCH4O75427 683 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 PROSCO94903 275 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 TYRP14679 529 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 MLLT6P55198 1093 aaPredicted RBP15.1■□□□□ 0.01
CNN1-208ENST00000588935 RPS24P62847 133 aaKnown RBP15.1■□□□□ 0.01
CNN1-208ENST00000588935 MLF2Q15773 248 aaPredicted RBP15.1■□□□□ 0.01
CNN1-208ENST00000588935 MPPE1Q53F39 396 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 FBXL22Q6P050 247 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 CIR1Q86X95 450 aaPredicted RBP15.1■□□□□ 0.01
CNN1-208ENST00000588935 SIX5Q8N196 739 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 CPXM2Q8N436 756 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 DNASE1L2Q92874 299 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 DHX35Q9H5Z1 703 aaKnown RBP15.1■□□□□ 0.01
CNN1-208ENST00000588935 FZD10Q9ULW2 581 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 USP18Q9UMW8 372 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 TTC28Q96AY4 2481 aa15.1■□□□□ 0.01
CNN1-208ENST00000588935 KRBA1A5PL33 1030 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 SPECC1L-ADORA2AF8WAN1 911 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 FAM72CH0Y354 149 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 TRIM24O15164 1050 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 PJA2O43164 708 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 MOCS3O95396 460 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 LATS1O95835 1130 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 CCDC175P0C221 793 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 IL1R2P27930 398 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 NUMBP49757 651 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 GALK1P51570 392 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 IRAK1P51617 712 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 TAS2R40P59535 323 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 ACAP1Q15027 740 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 PON2Q15165 354 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 CA9Q16790 459 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 SMTNL2Q2TAL5 461 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 ATP13A4Q4VNC1 1196 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 EFHC2Q5JST6 749 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 KCNT1Q5JUK3 1230 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 ZFYVE27Q5T4F4 411 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 FAM72AQ5TYM5 149 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 TXNRD3NBQ6F5E7 133 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 FAM72DQ6L9T8 149 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 TXNDC11Q6PKC3 985 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 C12orf40Q86WS4 652 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 FAM72BQ86X60 149 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 CARNMT1Q8N4J0 409 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 KIAA1958Q8N8K9 716 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 HSPH1Q92598 858 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 EDAQ92838 391 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 IGSF8Q969P0 613 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 CHFRQ96EP1 664 aa15.09■□□□□ 0.01
CNN1-208ENST00000588935 PRICKLE1Q96MT3 831 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms