RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 COCHO43405 550 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 PDGFRAP16234 1089 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 ARHGAP25P42331 645 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 PTPN9P43378 593 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 RNASE9P60153 205 aaKnown RBP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 PIGHQ14442 188 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 C10orf120Q5SQS8 335 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 SND1Q7KZF4 910 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 RNF10Q8N5U6 811 aaKnown RBP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 TTC16Q8NEE8 873 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 IER2Q9BTL4 223 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 OSER1Q9NX31 292 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 SMPD4Q9NXE4 827 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 ANAPC7Q9UJX3 599 aa16.75■□□□□ 0.27
ATG4D-205ENST00000586477 REXO2Q9Y3B8 237 aaKnown RBP16.75■□□□□ 0.27
ATG4D-205ENST00000586477 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 C2CD4BA6NLJ0 364 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 ATMINO43313 823 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 LILRB5O75023 590 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 GRAP2O75791 330 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 RNF8O76064 485 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 SLC2A3P11169 496 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 NOP2P46087 812 aaKnown RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 ZNF143P52747 638 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 COG7P83436 770 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 DMWDQ09019 674 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 LRRC32Q14392 662 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 SLC25A52Q3SY17 297 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 DGKKQ5KSL6 1271 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 CC2D1AQ6P1N0 951 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 DEFB106AQ8N104 65 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 SPEM1Q8N4L4 309 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 SUMF1Q8NBK3 374 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 SLC35G2Q8TBE7 412 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 ZNF830Q96NB3 372 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 CNPY3Q9BT09 278 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
ATG4D-205ENST00000586477 DCHS1Q96JQ0 3298 aa16.74■□□□□ 0.27
ATG4D-205ENST00000586477 EML5Q05BV3 1969 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 FAM170AA1A519 330 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 ANTXRLA6NF34 631 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 K7ESF4 209 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 EGFP01133 1207 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 IFNAR2P48551 515 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 GALK1P51570 392 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 ACBD5Q5T8D3 534 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 STRADAQ7RTN6 431 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 RXFP2Q8WXD0 754 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 NDRG1Q92597 394 aaKnown RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 EDEM1Q92611 657 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 ATP2A3Q93084 1043 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 PGAP3Q96FM1 320 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 PIWIL1Q96J94 861 aaKnown RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 ZSCAN32Q9NX65 697 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 MARCH2Q9P0N8 246 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
ATG4D-205ENST00000586477 HBS1LQ9Y450 684 aaKnown RBP16.73■□□□□ 0.27
ATG4D-205ENST00000586477 GREM1O60565 184 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 PAPSS2O95340 614 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-205ENST00000586477 TBX18O95935 607 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 CYP17A1P05093 508 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 MBL2P11226 248 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-205ENST00000586477 PSMA2P25787 234 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 MAN1A1P33908 653 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 RDXP35241 583 aaKnown RBP16.72■□□□□ 0.27
ATG4D-205ENST00000586477 FLT3P36888 993 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 OPRD1P41143 372 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 SLC1A1P43005 524 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 SULT1E1P49888 294 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 TAF5Q15542 800 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 PHLDB2Q86SQ0 1253 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 SYCE1Q8N0S2 351 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 CPA6Q8N4T0 437 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 KIAA1958Q8N8K9 716 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 NIPA2Q8N8Q9 360 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 DQX1Q8TE96 717 aaKnown RBP16.72■□□□□ 0.27
ATG4D-205ENST00000586477 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 NPY6RQ99463 290 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 HINFPQ9BQA5 517 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 POLR3BQ9NW08 1133 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-205ENST00000586477 RASAL2Q9UJF2 1139 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 NAALADL1Q9UQQ1 740 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 TLR6Q9Y2C9 796 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 PCDHGA2Q9Y5H1 932 aa16.72■□□□□ 0.27
ATG4D-205ENST00000586477 M0QYT0 321 aa16.71■□□□□ 0.27
ATG4D-205ENST00000586477 TRUB2O95900 331 aaKnown RBP16.71■□□□□ 0.27
ATG4D-205ENST00000586477 FYNP06241 537 aa16.71■□□□□ 0.27
ATG4D-205ENST00000586477 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
ATG4D-205ENST00000586477 CXCL12P48061 93 aa16.71■□□□□ 0.27
ATG4D-205ENST00000586477 CCR3P51677 355 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms