RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MS4A13Q5J8X5 152 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 SFMBT2Q5VUG0 894 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 E4F1Q66K89 784 aaPredicted RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 TRNP1Q6NT89 227 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 MON1BQ7L1V2 547 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 TRMT11Q7Z4G4 463 aaKnown RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 KIAA0907Q7Z7F0 614 aaPredicted RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 ATP6V0D2Q8N8Y2 350 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 PRMT1Q99873 361 aaKnown RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 XPO7Q9UIA9 1087 aaKnown RBP16.86■□□□□ 0.29
ERBB2-222ENST00000584908 SLC8A2Q9UPR5 921 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 R4GN57 208 aa16.86■□□□□ 0.29
ERBB2-222ENST00000584908 OTOGLQ3ZCN5 2332 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ITIH6Q6UXX5 1313 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 M0QYT0 321 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 TSPAN3O60637 253 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ENDOD1O94919 500 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 F9P00740 461 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 CALB1P05937 261 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 TIE1P35590 1138 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 CXCR3P49682 368 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 EIF4HQ15056 248 aaKnown RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 CRY1Q16526 586 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 LONP2Q86WA8 852 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ALLCQ8N6M5 410 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ZNF513Q8N8E2 541 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ZNF557Q8N988 423 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 HJURPQ8NCD3 748 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ATRIPQ8WXE1 791 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 SYN2Q92777 582 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 C11orf70Q9BRQ4 267 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 XPO4Q9C0E2 1151 aaKnown RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 NUCKS1Q9H1E3 243 aaKnown RBP16.85■□□□□ 0.29
ERBB2-222ENST00000584908 PIGVQ9NUD9 493 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 ADAM22Q9P0K1 906 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 EBF1Q9UH73 591 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 SLC12A6Q9UHW9 1150 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 CAPN11Q9UMQ6 739 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 SPAG17Q6Q759 2223 aa16.85■□□□□ 0.29
ERBB2-222ENST00000584908 FAM186AA6NE01 2351 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 TCRBV5S1A1TA0A578 114 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 GOLGA8SH3BPF8 625 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 SGK1O00141 431 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 NPC1O15118 1278 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 ADAM23O75077 832 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 KLF8O95600 359 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 MOCS2O96007 188 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 TPM3P06753 285 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 TFE3P19532 575 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 ABCB4P21439 1286 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 HOXC13P31276 330 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 CNR2P34972 360 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 DGKEP52429 567 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 RNASE9P60153 205 aaKnown RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 DMWDQ09019 674 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 ASIC2Q16515 512 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 EOGTQ5NDL2 527 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 BRMS1LQ5PSV4 323 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 ANKS1BQ7Z6G8 1248 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 TXNDC5Q8NBS9 432 aaKnown RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 C3orf20Q8ND61 904 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 NKD2Q969F2 451 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 MYEOVQ96EZ4 313 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 VCPIP1Q96JH7 1222 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 TBCBQ99426 244 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 EPC1Q9H2F5 836 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 HAUS4Q9H6D7 363 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 POLR3BQ9NW08 1133 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 ARHGEF38Q9NXL2 777 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 MUC22E2RYF6 1773 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-222ENST00000584908 CKAP5Q14008 2032 aa16.84■□□□□ 0.29
ERBB2-222ENST00000584908 PLXND1Q9Y4D7 1925 aa16.83■□□□□ 0.29
ERBB2-222ENST00000584908 GPR179Q6PRD1 2367 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 PRR23AA6NEV1 266 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 TBL1XO60907 577 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 APBB3O95704 486 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 GZMAP12544 262 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 TACR2P21452 398 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 HLA-FP30511 346 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 FNTBP49356 437 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 SULT1E1P49888 294 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 ZBED6P86452 979 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 NME3Q13232 169 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 ENPP2Q13822 863 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 EGFLAMQ63HQ2 1017 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 HGSNATQ68CP4 663 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 ACAD10Q6JQN1 1059 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 TMEM92Q6UXU6 159 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 ZNF571Q7Z3V5 609 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-222ENST00000584908 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
ERBB2-222ENST00000584908 CCDC33Q8N5R6 958 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms