RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ANO7	Q6IWH7	933 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	NUDT18	Q6ZVK8	323 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	TRMT11	Q7Z4G4	463 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	EPS8L1	Q8TE68	723 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	SLC39A13	Q96H72	371 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	PPP1R13B	Q96KQ4	1090 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	FCRL2	Q96LA5	508 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	SERPINB11	Q96P15	392 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	STK33	Q9BYT3	514 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	POPDC2	Q9HBU9	364 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	LIMA1	Q9UHB6	759 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	CLEC4E	Q9ULY5	219 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	TLR6	Q9Y2C9	796 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	SIK3	Q9Y2K2	1263 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	CEP295	Q9C0D2	2601 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ABCA7	Q8IZY2	2146 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	LNP1	A1A4G5	178 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	EPHB6	O15197	1021 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	IRAK2	O43187	625 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ERBB2	P04626	1255 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	TPM2	P07951	284 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	KRT9	P35527	623 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	SGSH	P51688	502 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	YWHAZ	P63104	245 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	PITX1	P78337	314 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	TAF5	Q15542	800 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	GEN1	Q17RS7	908 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ANO6	Q4KMQ2	910 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	FKBP15	Q5T1M5	1219 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	CAVIN1	Q6NZI2	390 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	OLFML1	Q6UWY5	402 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	FAM183BP	Q6ZVS7	135 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	NOP9	Q86U38	636 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	UNC45B	Q8IWX7	931 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	AOPEP	Q8N6M6	819 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	KDF1	Q8NAX2	398 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ADAM32	Q8TC27	787 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	DDI1	Q8WTU0	396 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	NOX5	Q96PH1	765 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ACOX2	Q99424	681 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	GABRG3	Q99928	467 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	SLC2A11	Q9BYW1	496 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	CD248	Q9HCU0	757 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	ASNSD1	Q9NWL6	643 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	CEP83	Q9Y592	693 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	LAMA1	P25391	3075 aa		13.84	□□□□□ -0.19
SREBF1-223	ENST00000584760	LRRC10B	A6NIK2	292 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	CAPN9	O14815	690 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	KHNYN	O15037	678 aa	Known RBP	13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	HSF2BP	O75031	334 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	GLI1	P08151	1106 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	ATP1A3	P13637	1013 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	HOXB2	P14652	356 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	NTSR1	P30989	418 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	SLC6A4	P31645	630 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	SLC11A2	P49281	568 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	JAM2	P57087	298 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	MPPE1	Q53F39	396 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	NADSYN1	Q6IA69	706 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	ANKS1B	Q7Z6G8	1248 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	ANKRD20A12P	Q8NF67	263 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	OLIG1	Q8TAK6	271 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	AZIN2	Q96A70	460 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	SLC2A13	Q96QE2	648 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	BPIFA3	Q9BQP9	254 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	ADAM33	Q9BZ11	813 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	IRX2	Q9BZI1	471 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	TPSD1	Q9BZJ3	242 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	POLM	Q9NP87	494 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	TMEM9B	Q9NQ34	198 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	WASF3	Q9UPY6	502 aa		13.83	□□□□□ -0.2
SREBF1-223	ENST00000584760	FRY	Q5TBA9	3013 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760		A0A1W2PQF6	199 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	PATE3	B3GLJ2	98 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	ACSL4	O60488	711 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	TSPAN3	O60637	253 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	TRUB2	O95900	331 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	CEACAM1	P13688	526 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	HLA-F	P30511	346 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	POLR2F	P61218	127 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	EIF4H	Q15056	248 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	SYCP1	Q15431	976 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	UAP1L1	Q3KQV9	507 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	USP39	Q53GS9	565 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	DCAF6	Q58WW2	860 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	PIK3R6	Q5UE93	754 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	TAF3	Q5VWG9	929 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	RFWD3	Q6PCD5	774 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	SLC26A9	Q7LBE3	791 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	CHPF	Q8IZ52	775 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	TMEM35B	Q8NCS4	154 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	IPO4	Q8TEX9	1081 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	ERGIC2	Q96RQ1	377 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	FUCA2	Q9BTY2	467 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	SCNM1	Q9BWG6	230 aa		13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	NAT10	Q9H0A0	1025 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-223	ENST00000584760	XPO7	Q9UIA9	1087 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms