RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
CDRT1-207ENST00000583965 UNC80Q8N2C7 3258 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 PAGE1O75459 146 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 FTCDO95954 541 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 RARAP10276 462 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 TCF4P15884 667 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 IL1R2P27930 398 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 HTR7P34969 479 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 CTNNA1P35221 906 aaKnown RBP12.07□□□□□ -0.48
CDRT1-207ENST00000583965 VIPR2P41587 438 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 MLLT6P55198 1093 aaPredicted RBP12.07□□□□□ -0.48
CDRT1-207ENST00000583965 FCHO2Q0JRZ9 810 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 HTR4Q13639 388 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 DPYSL2Q16555 572 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 MS4A13Q5J8X5 152 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 ZNF569Q5MCW4 686 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 MEI1Q5TIA1 1274 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 VITQ6UXI7 678 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 UBL4BQ8N7F7 174 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 ATXN2LQ8WWM7 1075 aaKnown RBP12.07□□□□□ -0.48
CDRT1-207ENST00000583965 WBP2Q969T9 261 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 RSPRY1Q96DX4 576 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 ZWILCHQ9H900 591 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 IGSF9Q9P2J2 1179 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 JRKLQ9Y4A0 524 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 PCDHA3Q9Y5H8 950 aa12.07□□□□□ -0.48
CDRT1-207ENST00000583965 LOC730098B7Z3J9 87 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 I6L893 689 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 IL9P15248 144 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PSMC3P17980 439 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 L1CAMP32004 1257 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 IFNAR2P48551 515 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PDK2Q15119 407 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PDGFRLQ15198 375 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 SMTNL2Q2TAL5 461 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PIK3R6Q5UE93 754 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PARM1Q6UWI2 310 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 VSIG1Q86XK7 387 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 MAP7D3Q8IWC1 876 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 ADHFE1Q8IWW8 467 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 BBS7Q8IWZ6 715 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 YAF2Q8IY57 180 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 KATNAL2Q8IYT4 538 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 RIN3Q8TB24 985 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 FAM71BQ8TC56 605 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 OSCP1Q8WVF1 389 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 FGF14Q92915 247 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 LRRC3BQ96PB8 259 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 EPAS1Q99814 870 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 PRMT1Q99873 361 aaKnown RBP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 SIK2Q9H0K1 926 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 DHX35Q9H5Z1 703 aaKnown RBP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 RETREG1Q9H6L5 497 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 ANLNQ9NQW6 1124 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 RCOR3Q9P2K3 495 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 OR12D3Q9UGF7 316 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 XPO7Q9UIA9 1087 aaKnown RBP12.06□□□□□ -0.48
CDRT1-207ENST00000583965 HS3ST4Q9Y661 456 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 NUMBLQ9Y6R0 609 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 COL4A2P08572 1712 aa12.06□□□□□ -0.48
CDRT1-207ENST00000583965 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 F5H5T6 163 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 CHADO15335 359 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TACR2P21452 398 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 SP100P23497 879 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 GJC1P36383 396 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 HCAR3P49019 387 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 RWDD2BP57060 319 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 GNG11P61952 73 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 SEMA3BQ13214 749 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 AUHQ13825 339 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 ODF2Q5BJF6 829 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 FAM133BQ5BKY9 247 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 KCNT1Q5JUK3 1230 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 ZFYVE27Q5T4F4 411 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TTC39BQ5VTQ0 682 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 NADSYN1Q6IA69 706 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 LRRC31Q6UY01 552 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 SLC35F6Q8N357 371 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 KCTD6Q8NC69 237 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 KIF18AQ8NI77 898 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 HSPH1Q92598 858 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 ATP2A3Q93084 1043 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 RBM41Q96IZ5 413 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 KXD1Q9BQD3 176 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TRMT61BQ9BVS5 477 aaKnown RBP12.05□□□□□ -0.48
CDRT1-207ENST00000583965 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
CDRT1-207ENST00000583965 DUS2Q9NX74 493 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms