RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 CSF1RP07333 972 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 CHN1P15882 459 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 ACO1P21399 889 aaKnown RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 ICAM3P32942 547 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 HTR7P34969 479 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 THBS4P35443 961 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 RPS19P39019 145 aaKnown RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 CHN2P52757 468 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 LOXL3P58215 753 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 PSMC6P62333 389 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 ZNF844Q08AG5 666 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 STK4Q13043 487 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 CCNIQ14094 377 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 MED22Q15528 200 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 TAF3Q5VWG9 929 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 NAA35Q5VZE5 725 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 ANKRD40Q6AI12 368 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 CRIP3Q6Q6R5 217 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 Q6ZSN1 163 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 GPRIN1Q7Z2K8 1008 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 GALNTL5Q7Z4T8 443 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 POLNQ7Z5Q5 900 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 LRRC71Q8N4P6 559 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 CHCHD4Q8N4Q1 142 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 METTL25Q8N6Q8 603 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 KCTD6Q8NC69 237 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 SLC16A11Q8NCK7 471 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 ETNPPLQ8TBG4 499 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 ZCCHC10Q8TBK6 192 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 EDAQ92838 391 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 CNDP2Q96KP4 475 aaKnown RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 ZNF512Q96ME7 567 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 CPPED1Q9BRF8 314 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 PTDSS2Q9BVG9 487 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 RANBP17Q9H2T7 1088 aaKnown RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 SEMA4BQ9NPR2 832 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 HCFC1R1Q9NWW0 138 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 SLC25A10Q9UBX3 287 aaPredicted RBP5.29□□□□□ -1.56
SS18-223ENST00000583595 CLCA2Q9UQC9 943 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 TMEM5Q9Y2B1 443 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 GDAQ9Y2T3 454 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 NEU2Q9Y3R4 380 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 PCDHGB5Q9Y5G0 923 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 LYVE1Q9Y5Y7 322 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 SLC30A1Q9Y6M5 507 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 COL15A1P39059 1388 aa5.29□□□□□ -1.56
SS18-223ENST00000583595 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 PASKQ96RG2 1323 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 BICDL2A1A5D9 508 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 CTIFO43310 598 aaKnown RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 ERBB2P04626 1255 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 NR2F1P10589 423 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 ACP5P13686 325 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 DRD1P21728 446 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 PSMA4P25789 261 aaKnown RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 PDE6CP51160 858 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 KRT83P78385 493 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 SP2Q02086 613 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 PIGFQ07326 219 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 RIN1Q13671 783 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 E2F2Q14209 437 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 BMP2KLQ5H9B9 411 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 RGS7BPQ6MZT1 257 aaPredicted RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 NAA16Q6N069 864 aaPredicted RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 FAM111BQ6SJ93 734 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 KIAA1324Q6UXG2 1013 aaKnown RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 DNAJB7Q7Z6W7 309 aaPredicted RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 Q8N1X5 172 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 WDTC1Q8N5D0 677 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 ARRDC3Q96B67 414 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 SH3KBP1Q96B97 665 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 KIF1BPQ96EK5 621 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 PAAF1Q9BRP4 392 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 ADPGKQ9BRR6 497 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 INTS2Q9H0H0 1204 aaKnown RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 OR10A4Q9H209 315 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 MROH8Q9H579 483 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 TMEM51Q9NW97 253 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 HSFX1Q9UBD0 423 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 TRPC5Q9UL62 973 aaPredicted RBP5.28□□□□□ -1.56
SS18-223ENST00000583595 NFU1Q9UMS0 254 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 SLC12A4Q9UP95 1085 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 SSX2IPQ9Y2D8 614 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 CEP162Q5TB80 1403 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 AATKQ6ZMQ8 1374 aa5.28□□□□□ -1.56
SS18-223ENST00000583595 FAM90A7PA6NKC0 464 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 FAM90A22PA8MWA6 464 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 FAM90A12PA8MX19 464 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 FAM90A23PA8MXZ1 464 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 PRR5-ARHGAP8B1AHC4 643 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 SH2B2O14492 632 aaPredicted RBP5.27□□□□□ -1.57
SS18-223ENST00000583595 SYN3O14994 580 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 URODP06132 367 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 TM4SF1P30408 202 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 GCH1P30793 250 aa5.27□□□□□ -1.57
SS18-223ENST00000583595 CTNNA1P35221 906 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms