RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TMEM245Q9H330 911 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 ABCC13Q9NSE7 274 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 HESX1Q9UBX0 185 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 PLA2G4CQ9UP65 541 aa11.07□□□□□ -0.64
RFFL-209ENST00000581265 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 YJEFN3A6XGL0 299 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 E7ENQ6 273 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 O00370 1275 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 ACADMP11310 421 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 VDRP11473 427 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 YWHAEP62258 255 aaKnown RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 ARID5AQ03989 594 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 ADIGQ0VDE8 80 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 MPP7Q5T2T1 576 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 DCAF12L1Q5VU92 463 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 TCERG1LQ5VWI1 586 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 IL27RAQ6UWB1 636 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 GLRX5Q86SX6 157 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 ADIPOR2Q86V24 386 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 NAXDQ8IW45 347 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 ZCCHC9Q8N567 271 aaKnown RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 UBR7Q8N806 425 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.06□□□□□ -0.64
RFFL-209ENST00000581265 OR2T3Q8NH03 318 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 WFIKKN2Q8TEU8 576 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 GSDMAQ96QA5 445 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 MIR1-1HGQ9H1L0 117 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 CNGB3Q9NQW8 809 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
RFFL-209ENST00000581265 EIF2B4Q9UI10 523 aaKnown RBP11.06□□□□□ -0.64
RFFL-209ENST00000581265 TSPAN3O60637 253 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 GABBR2O75899 941 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 PRB1P04280 392 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 FTH1P19P0C7X4 201 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 SETSIPP0DME0 302 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 HLA-EP13747 358 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 CD19P15391 556 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
RFFL-209ENST00000581265 BNC1Q01954 994 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 ZBTB16Q05516 673 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 PNOCQ13519 176 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 CKAP5Q14008 2032 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 PTPRNQ16849 979 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
RFFL-209ENST00000581265 MSANTD2Q6P1R3 559 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 LCLAT1Q6UWP7 414 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 FMR1NBQ8N0W7 255 aaPredicted RBP11.05□□□□□ -0.64
RFFL-209ENST00000581265 SIX6OS1Q8N1H7 587 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 SPATA20Q8TB22 786 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 UBA3Q8TBC4 463 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 SLC35F5Q8WV83 523 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 EDEM1Q92611 657 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 SLC35C1Q96A29 364 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 AZIN2Q96A70 460 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 TSG101Q99816 390 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 GAREM1Q9H706 876 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 FBRSQ9HAH7 460 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 OSGEPQ9NPF4 335 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 KIAA1522Q9P206 1035 aaPredicted RBP11.05□□□□□ -0.64
RFFL-209ENST00000581265 ARMCX3Q9UH62 379 aaPredicted RBP11.05□□□□□ -0.64
RFFL-209ENST00000581265 PCOLCE2Q9UKZ9 415 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 PCDHGB2Q9Y5G2 931 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 NUMA1Q14980 2115 aa11.05□□□□□ -0.64
RFFL-209ENST00000581265 PMM2O15305 246 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 CER1O95813 267 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 IGLV3-27P01718 113 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 ATP5BP06576 529 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 PAEPP09466 180 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 DLDP09622 509 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 ACSL1P33121 698 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 MATKP42679 507 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 AFF3P51826 1226 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 PMS1P54277 932 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 DAOAP59103 153 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 CNGA2Q16280 664 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 HLA-BQ31612 363 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 PIK3R6Q5UE93 754 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 PMF1Q6P1K2 205 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 CCNI2Q6ZMN8 369 aaPredicted RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 CHST9Q7L1S5 443 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 SLCO6A1Q86UG4 719 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 UNC45BQ8IWX7 931 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 AHI1Q8N157 1196 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 PNPLA1Q8N8W4 532 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 CYB5D2Q8WUJ1 264 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 IRGQQ8WZA9 623 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 TFAP2BQ92481 460 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
RFFL-209ENST00000581265 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
RFFL-209ENST00000581265 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms