RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 MEA1Q16626 185 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 N4BP2L1Q5TBK1 243 aaPredicted RBP22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 PEAR1Q5VY43 1037 aaPredicted RBP22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 NADSYN1Q6IA69 706 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 SERPINA13PQ6UXR4 307 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 CHST9Q7L1S5 443 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 KIAA0907Q7Z7F0 614 aaPredicted RBP22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 TMEM110Q86TL2 294 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 METTL3Q86U44 580 aaKnown RBP22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 ADIPOR2Q86V24 386 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 TMPRSS6Q8IU80 811 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 WFDC5Q8TCV5 224 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 CYB5D2Q8WUJ1 264 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 AZIN2Q96A70 460 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 ITM2CQ9NQX7 267 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 GGA2Q9UJY4 613 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 TLR6Q9Y2C9 796 aa22.13■■□□□ 1.13
CSNK1D-215ENST00000580784 GTPBP10A4D1E9 387 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 NDUFS2O75306 463 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 CFIP05156 583 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 HLA-EP13747 358 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 LMAN2Q12907 356 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 DPCR1Q3MIW9 517 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 MPP7Q5T2T1 576 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 DAB2IPQ5VWQ8 1189 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 WDTC1Q8N5D0 677 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.12■■□□□ 1.139e-6■■■□□ 15.9
CSNK1D-215ENST00000580784 WFIKKN2Q8TEU8 576 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 SHC3Q92529 594 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 MYEOVQ96EZ4 313 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 SLC39A13Q96H72 371 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 ZNF419Q96HQ0 510 aaPredicted RBP22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 HSPA12BQ96MM6 686 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 SERPINB11Q96P15 392 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 FSCN3Q9NQT6 498 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 STIM2Q9P246 746 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 TJP2Q9UDY2 1190 aa22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 AJAP1Q9UKB5 411 aaPredicted RBP22.12■■□□□ 1.13
CSNK1D-215ENST00000580784 ACACBO00763 2458 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 KCNJ18B7U540 433 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 CAPN9O14815 690 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 IRAK2O43187 625 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 PABPC1P11940 636 aaKnown RBP22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 ENGP17813 658 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 CD6P30203 668 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 CD70P32970 193 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 HOXD12P35452 270 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 COPAP53621 1224 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 YWHAZP63104 245 aaKnown RBP22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 DUOXA1Q1HG43 343 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 UAP1L1Q3KQV9 507 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 HSP90AA4PQ58FG1 418 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 BEND5Q7L4P6 421 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 TAC4Q86UU9 113 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 SIPA1Q96FS4 1042 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 CNTNAP3BQ96NU0 1288 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 CNTNAP3Q9BZ76 1288 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 IRX2Q9BZI1 471 aaPredicted RBP22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 THAP9Q9H5L6 903 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 SIX2Q9NPC8 291 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 USP36Q9P275 1121 aaKnown RBP22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 PLA2G4CQ9UP65 541 aa22.11■■□□□ 1.13
CSNK1D-215ENST00000580784 MUC22E2RYF6 1773 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 MAPK8P45983 427 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 TPMTP51580 245 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 RPS24P62847 133 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 PDCLQ13371 301 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 NNTQ13423 1086 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 TAF5Q15542 800 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 MAN2A1Q16706 1144 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 PTPRNQ16849 979 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 FNDC3BQ53EP0 1204 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 MBLAC2Q68D91 279 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 PSAPL1Q6NUJ1 521 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 CACUL1Q86Y37 369 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 AHI1Q8N157 1196 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 ZNF366Q8N895 744 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 CEP76Q8TAP6 659 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 PRCCQ92733 491 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 TOE1Q96GM8 510 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 PRICKLE1Q96MT3 831 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 DDX50Q9BQ39 737 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 NUCKS1Q9H1E3 243 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 TMEM245Q9H330 911 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 POPDC2Q9HBU9 364 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 WSB2Q9NYS7 404 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 DNAJC12Q9UKB3 198 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 SLC6A14Q9UN76 642 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 CHD8Q9HCK8 2581 aa22.1■■□□□ 1.13
CSNK1D-215ENST00000580784 GIPC1O14908 333 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 MOCS2O96007 188 aaPredicted RBP22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 SERPINF2P08697 491 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 CAMK2GQ13555 558 aaPredicted RBP22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 PASD1Q8IV76 773 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 RGL4Q8IZJ4 473 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 HJURPQ8NCD3 748 aaPredicted RBP22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 TRIM62Q9BVG3 475 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 NUP62CLQ9H1M0 184 aa22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 XPO7Q9UIA9 1087 aaKnown RBP22.09■■□□□ 1.13
CSNK1D-215ENST00000580784 FOXN3O00409 490 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms