RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RSRC2Q7L4I2 434 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SCD5Q86SK9 330 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DENND1CQ8IV53 801 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FGF11Q92914 225 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PLD4Q96BZ4 506 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 P2RY11Q96G91 374 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CNDP2Q96KP4 475 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HMGXB4Q9UGU5 601 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SUN2Q9UH99 717 aa12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 UBR5O95071 2799 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TLN1Q9Y490 2541 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-216ENST00000579853 A0A1W2PPC4 97 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 J3QKU1 62 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 IKBKBO14920 756 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ITGAVP06756 1048 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HMBSP08397 361 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ACTN2P35609 894 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ASPAP45381 313 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RPS14P62263 151 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 EHHADHQ08426 723 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 E2F4Q16254 413 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZNF776Q68DI1 518 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZNF557Q8N988 423 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TMEM174Q8WUU8 243 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 C7orf25Q9BPX7 421 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DUSP16Q9BY84 665 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CLEC4EQ9ULY5 219 aa12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ERVH48-1M5A8F1 160 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 KIF20AO95235 890 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LATS1O95835 1130 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HLA-FP30511 346 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC8A3P57103 927 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 IL9RQ01113 521 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CFHR1Q03591 330 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LRRK2Q5S007 2527 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HES3Q5TGS1 186 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 KIAA0895LQ68EN5 471 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 FBXL19Q6PCT2 694 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CHST9Q7L1S5 443 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 OXR1Q8N573 874 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PLEKHO2Q8TD55 490 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SAP25Q8TEE9 199 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 GANCQ8TET4 914 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 WBP1Q96G27 269 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 UBXN6Q9BZV1 441 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PRSS16Q9NQE7 514 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 GDF3Q9NR23 364 aa12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 OLA1Q9NTK5 396 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TP53BP1Q12888 1972 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 MYLKQ15746 1914 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 IGHV4-34P06331 123 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CD38P28907 300 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 PIK3CAP42336 1068 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ACADVLP49748 655 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 UCNP55089 124 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 STK38Q15208 465 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC45A4Q5BKX6 768 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 LAYNQ6UX15 382 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SV2AQ7L0J3 742 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 KIAA0907Q7Z7F0 614 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CCDC150Q8NCX0 1101 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 CYB5D2Q8WUJ1 264 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 DHX58Q96C10 678 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 TMA16Q96EY4 203 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 USP28Q96RU2 1077 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ORAI3Q9BRQ5 295 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 BACH2Q9BYV9 841 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 SLC39A2Q9NP94 309 aa12.74□□□□□ -0.37
CDK5RAP3-216ENST00000579853 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms