RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 HS3ST4Q9Y661 456 aa14.36□□□□□ -0.11
TSEN54-206ENST00000579449 CDH23Q9H251 3354 aa14.36□□□□□ -0.11
TSEN54-206ENST00000579449 DOCK4Q8N1I0 1966 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 SOBPA7XYQ1 873 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 H3BRJ5 948 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 EEF2KO00418 725 aaKnown RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 TBX10O75333 385 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CKMP06732 381 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 GOT1P17174 413 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CORO1AP31146 461 aaKnown RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ARL4AP40617 200 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ZXDBP98169 803 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 DLX2Q07687 328 aaPredicted RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ADCY2Q08462 1091 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CLUL1Q15846 466 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ANKRD20A8PQ5CZ79 823 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 PIK3R6Q5UE93 754 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 EP400NLQ6ZTU2 488 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 MICALL1Q8N3F8 863 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CEP112Q8N8E3 955 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 FAF2Q96CS3 445 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CSPG4P5Q96PW8 444 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 RNF157Q96PX1 679 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 MAK16Q9BXY0 300 aaKnown RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 RCOR3Q9P2K3 495 aaPredicted RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CDH22Q9UJ99 828 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
TSEN54-206ENST00000579449 CLUHO75153 1309 aa14.35□□□□□ -0.11
TSEN54-206ENST00000579449 REV3LO60673 3130 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ACSL4O60488 711 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 TJP3O95049 919 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 KLKB1P03952 638 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 AMPD1P23109 780 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 FSHRP23945 695 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 TPI1P60174 286 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 MTA1Q13330 715 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 KLF1Q13351 362 aaPredicted RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 SIX1Q15475 284 aaPredicted RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 MS4A13Q5J8X5 152 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 POTEHQ6S545 545 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 C14orf80Q86SX3 495 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 DENND1CQ8IV53 801 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ZDHHC14Q8IZN3 488 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 MNS1Q8NEH6 495 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 PCDH19Q8TAB3 1148 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 MAIP1Q8WWC4 291 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 C1orf74Q96LT6 269 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ZSWIM3Q96MP5 696 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 EPAS1Q99814 870 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 AP1M1Q9BXS5 423 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 SMG9Q9H0W8 520 aaKnown RBP14.34□□□□□ -0.11
TSEN54-206ENST00000579449 S1PR5Q9H228 398 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ADAM7Q9H2U9 754 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ZMYM5Q9UJ78 669 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 ARHGAP26Q9UNA1 814 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 NR2E1Q9Y466 385 aa14.34□□□□□ -0.11
TSEN54-206ENST00000579449 NUP205Q92621 2012 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 GOLGA6L7A0A1B0GV03 622 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CTAGE15A4D2H0 777 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 E9PAM4 449 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 LEFTY2O00292 366 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 KRIT1O00522 736 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CST8O60676 142 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 LRIG2O94898 1065 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CTAGE8P0CG41 777 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 AVPR1AP37288 418 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 HCAR3P49019 387 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 SLC11A2P49281 568 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 DYNLT1P63172 113 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 NRG1Q02297 640 aaPredicted RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 ITIH3Q06033 890 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 C2orf54Q08AI8 447 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 AUHQ13825 339 aaKnown RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 DPYSQ14117 519 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 TFDP2Q14188 446 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CBX2Q14781 532 aaPredicted RBP14.33□□□□□ -0.12
TSEN54-206ENST00000579449 COL19A1Q14993 1142 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 RAP1GAP2Q684P5 730 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 RFX8Q6ZV50 586 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 BBS12Q6ZW61 710 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CTAGE6Q86UF2 777 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 CTAGE4Q8IX94 777 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 ZNF683Q8IZ20 524 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 PQLC3Q8N755 202 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 LRRN4CLQ8ND94 238 aa14.33□□□□□ -0.12
TSEN54-206ENST00000579449 SPATA4Q8NEY3 305 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms