RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CHST9Q7L1S5 443 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 RABEPKQ7Z6M1 372 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 IRF2BP1Q8IU81 584 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 PRCCQ92733 491 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SIPA1Q96FS4 1042 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 HSPA12BQ96MM6 686 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SLC4A5Q9BY07 1137 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 ABCB8Q9NUT2 735 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 WSB2Q9NYS7 404 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 LAMA1P25391 3075 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 CAPN9O14815 690 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SERPINF2P08697 491 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SLC6A4P31645 630 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 USP8P40818 1118 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 NOVA1P51513 510 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 COPAP53621 1224 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 GFPT1Q06210 699 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 TPD52L1Q16890 204 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 EXOC3L4Q17RC7 722 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 FAM133BQ5BKY9 247 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SYCP2LQ5T4T6 812 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 BEND5Q7L4P6 421 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 ADIPOR2Q86V24 386 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 FCRL2Q96LA5 508 aaPredicted RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SERPINB11Q96P15 392 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 DDX50Q9BQ39 737 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 USP36Q9P275 1121 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 APEX2Q9UBZ4 518 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 CYTH4Q9UIA0 394 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 GGA2Q9UJY4 613 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 BECN2A8MW95 431 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 KCNJ18B7U540 433 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 E5RJQ4 531 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 GIPC1O14908 333 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 PAPSS1O43252 624 aaPredicted RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 ACADMP11310 421 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 HLA-EP13747 358 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 PI4KAP42356 2102 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 MAPK8P45983 427 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 TPMTP51580 245 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 ATXN3P54252 364 aaPredicted RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 APBA1Q02410 837 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 NNTQ13423 1086 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 FNDC3BQ53EP0 1204 aaKnown RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 SYPL2Q5VXT5 272 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 MBLAC2Q68D91 279 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 ZNF557Q8N988 423 aaPredicted RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 CYB5D2Q8WUJ1 264 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 TOE1Q96GM8 510 aaKnown RBP16.5■□□□□ 0.23
CRLF3-203ENST00000578692 SLC39A13Q96H72 371 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 TRIM62Q9BVG3 475 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 TMEM245Q9H330 911 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 FSCN3Q9NQT6 498 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 STIM2Q9P246 746 aa16.5■□□□□ 0.23
CRLF3-203ENST00000578692 GON4LQ3T8J9 2241 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 ATP5BP06576 529 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 CEACAM1P13688 526 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 POLR2EP19388 210 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 CSRP1P21291 193 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 PON1P27169 355 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 MAOBP27338 520 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 PMLP29590 882 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 OXTRP30559 389 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 CD70P32970 193 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 YWHAZP63104 245 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 CAMK2GQ13555 558 aaPredicted RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 WDR45BQ5MNZ6 344 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 MFN1Q8IWA4 741 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 OR2T3Q8NH03 318 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 FIBINQ8TAL6 211 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 WFDC5Q8TCV5 224 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 GTPBP2Q9BX10 602 aaKnown RBP16.49■□□□□ 0.23
CRLF3-203ENST00000578692 GPR174Q9BXC1 333 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 CLSTN2Q9H4D0 955 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 THAP9Q9H5L6 903 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 POPDC2Q9HBU9 364 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 ANGPTL2Q9UKU9 493 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 NCOR2Q9Y618 2525 aa16.49■□□□□ 0.23
CRLF3-203ENST00000578692 ADAMTS9Q9P2N4 1935 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 SPTBN2O15020 2390 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
CRLF3-203ENST00000578692 ARHGAP33O14559 1287 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 DLDP09622 509 aaKnown RBP16.48■□□□□ 0.23
CRLF3-203ENST00000578692 PTPRNQ16849 979 aa16.48■□□□□ 0.23
CRLF3-203ENST00000578692 TAC4Q86UU9 113 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms