RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 OR6B2Q6IFH4 312 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 CCDC33Q8N5R6 958 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 ALLCQ8N6M5 410 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 ZNF513Q8N8E2 541 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 TXNDC5Q8NBS9 432 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 MSANTD4Q8NCY6 345 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 C18orf8Q96DM3 657 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 TMA16Q96EY4 203 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 HHIPQ96QV1 700 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 POLR3BQ9NW08 1133 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 TMEM51Q9NW97 253 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 USP24Q9UPU5 2620 aa14.18□□□□□ -0.14
CSNK1D-208ENST00000578501 CHD6Q8TD26 2715 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 PRRT4C9JH25 899 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 SGK1O00141 431 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 NPC1O15118 1278 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 ADAM23O75077 832 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 SLC2A3P11169 496 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 HNRNPLP14866 589 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 HOXC13P31276 330 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 GBP1P32455 592 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 NOMO3P69849 1222 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 MTA1Q13330 715 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 PIK3R6Q5UE93 754 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 TMEM92Q6UXU6 159 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 TRIM72Q6ZMU5 477 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 RASSF3Q86WH2 238 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 ERICH1Q86X53 443 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 DEFB106AQ8N104 65 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 ZNF557Q8N988 423 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 TSTD1Q8NFU3 115 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 GAB3Q8WWW8 586 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 RRN3Q9NYV6 651 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 HCN2Q9UL51 889 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
CSNK1D-208ENST00000578501 A0A1B0GTH6 734 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 KCNU1A8MYU2 1149 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 AXIN1O15169 862 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 TEX33O43247 280 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 TIMM44O43615 452 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 DAB1O75553 588 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ALDH1A2O94788 518 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 APOEP02649 317 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 CYP1A1P04798 512 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 CHRNB2P17787 502 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 NTSR1P30989 418 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 SLC6A4P31645 630 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 NOS2P35228 1153 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 MATKP42679 507 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 FMO1Q01740 532 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 EIF4HQ15056 248 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 N4BP2L1Q5TBK1 243 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ARCQ7LC44 396 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ANKS1BQ7Z6G8 1248 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 SLC20A1Q8WUM9 679 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 BTN2A3PQ96KV6 586 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 GABRG3Q99928 467 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 CBX8Q9HC52 389 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 POLMQ9NP87 494 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 SLC12A6Q9UHW9 1150 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 ATG2BQ96BY7 2078 aa14.16□□□□□ -0.14
CSNK1D-208ENST00000578501 BAHCC1Q9P281 2608 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 A0A1W2PQC6 194 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 GDF9O60383 454 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 TSPAN3O60637 253 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 GRAP2O75791 330 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 RPP40O75818 363 aaKnown RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 PROS1P07225 676 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 CCDC172P0C7W6 258 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 MMP8P22894 467 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 CCR1P32246 355 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 PXNP49023 591 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 TPM4P67936 248 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 PITX1P78337 314 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 NR1I3Q14994 352 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 ACAP1Q15027 740 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 GEN1Q17RS7 908 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 AASDHQ4L235 1098 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 ZC3H12AQ5D1E8 599 aaKnown RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 NAA35Q5VZE5 725 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 EGFLAMQ63HQ2 1017 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 NADSYN1Q6IA69 706 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 SDE2Q6IQ49 451 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 KIAA0907Q7Z7F0 614 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 XYLT1Q86Y38 959 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 ATP6V0D2Q8N8Y2 350 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 CPA5Q8WXQ8 436 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 NT5C3BQ969T7 300 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 PGAP3Q96FM1 320 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 NPY6RQ99463 290 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 FAM204AQ9H8W3 233 aa14.15□□□□□ -0.14
CSNK1D-208ENST00000578501 DDIT4Q9NX09 232 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms