RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 METTL12A8MUP2 240 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 LATS1O95835 1130 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 C7P10643 843 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 VDRP11473 427 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 DCAF17Q5H9S7 520 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 ADGRF1Q5T601 910 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 BSPRYQ5W0U4 402 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 SERPINA13PQ6UXR4 307 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 KCTD13Q8WZ19 329 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 PCED1AQ9H1Q7 454 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 ABCC13Q9NSE7 274 aa13.11□□□□□ -0.31
SMARCD2-207ENST00000578234 YJEFN3A6XGL0 299 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 E7ENQ6 273 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 TSPAN3O60637 253 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 EPHX1P07099 455 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 CD19P15391 556 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 PRKCHP24723 683 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 HLA-FP30511 346 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 PPP1R2P41236 205 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 ADIGQ0VDE8 80 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 GRIK2Q13002 908 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 PAK1Q13153 545 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 SORCS1Q8WY21 1168 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 CNGB3Q9NQW8 809 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 ARMCX3Q9UH62 379 aaPredicted RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 PLA2G4CQ9UP65 541 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 KNL1Q8NG31 2342 aa13.1□□□□□ -0.31
SMARCD2-207ENST00000578234 O00370 1275 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 BCAT2O15382 392 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 PAEPP09466 180 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 RING1Q06587 406 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 MPP7Q5T2T1 576 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 MSANTD2Q6P1R3 559 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 RAB44Q7Z6P3 723 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 NAXDQ8IW45 347 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 SIX6OS1Q8N1H7 587 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 UBR7Q8N806 425 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 OR2T3Q8NH03 318 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 SLC35F5Q8WV83 523 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 EDEM1Q92611 657 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 SLC35C1Q96A29 364 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 FREM2Q5SZK8 3169 aa13.09□□□□□ -0.31
SMARCD2-207ENST00000578234 BICDL2A1A5D9 508 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 PMM2O15305 246 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 ZNF883P0CG24 379 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 DAOAP59103 153 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 LRMPQ12912 555 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 FNDC3BQ53EP0 1204 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 IL27RAQ6UWB1 636 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 RBM43Q6ZSC3 357 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 GLRX5Q86SX6 157 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 MLKLQ8NB16 471 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 GANCQ8TET4 914 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 ADAMTS14Q8WXS8 1223 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 GAREM1Q9H706 876 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 EIF2B4Q9UI10 523 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 ATRXP46100 2492 aa13.08□□□□□ -0.32
SMARCD2-207ENST00000578234 NUMA1Q14980 2115 aa13.07□□□□□ -0.32
SMARCD2-207ENST00000578234 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
SMARCD2-207ENST00000578234 CBFA2T3O75081 653 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms